|
Name : fliP (OCA5_c25850) Accession : YP_004633521.1 Strain : Oligotropha carboxidovorans OM5 Genome accession: NC_015684 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2740590 - 2741351 bp Length : 762 bp Strand : + Note : - DNA sequence : GTGAGGCCGGCAAAACCTCCGCGTAGAGTTCTGTTTCTTTCCGTCCTGATCGCCGCCGCAACGCTGGCCACGGCCGCGGC TGCGCAGGACATCAGCATCAATTTCGGCGGTCAGGGCAATGGCGGCGTCACCGAACGCGCGATCCAGCTCATCGCACTGC TGACGGTGCTGTCGATTGCGCCTTCCATCCTCGTGATGATGACCTCGTTCACGCGGATCGTCGTCGTGCTGTCGCTGCTG CGCACCGCACTCGGGACCGCGACCGCACCACCGAACTCGGTGATGATTGCGCTGGCGCTATTCCTCACCGGCTTCGTGAT GGGGCCTGTGCTGCAGAAATCCTACGACGAAGGCGTGAAGCCGGTGATCGCCAACGAGCTTTCCGTCGAGCAGGGTTTCG AGCGTGCCGTGGGGCCGCTGCGCGGCTTCATGCAGAAGAACGTCCGCGAAAAGGACCTCAAGCTGTTCATGGATCTCTCG GGCGAACCGCCACCGGCAACGCCCGAGGAAATGTCGCTGCGCATCCTCATCCCCGCCTTCATGATCTCCGAACTCAAACG CGCATTCGAGATCGGCTTTCTGTTGTTCCTGCCCTTCCTCATCATCGACCTCGTGGTGTCGTCGGTGCTGATGTCGATGG GCATGATGATGCTTCCACCGGTCGTGGTGTCGCTGCCATTCAAGCTGATCTTTTTCGTGCTGGTGGACGGCTGGGCGCTC GTCGCCGGCAGCCTCGTGCAAAGCTACGGCGGCGGCGGATAA Protein sequence : MRPAKPPRRVLFLSVLIAAATLATAAAAQDISINFGGQGNGGVTERAIQLIALLTVLSIAPSILVMMTSFTRIVVVLSLL RTALGTATAPPNSVMIALALFLTGFVMGPVLQKSYDEGVKPVIANELSVEQGFERAVGPLRGFMQKNVREKDLKLFMDLS GEPPPATPEEMSLRILIPAFMISELKRAFEIGFLLFLPFLIIDLVVSSVLMSMGMMMLPPVVVSLPFKLIFFVLVDGWAL VAGSLVQSYGGGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 2e-17 | 46 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 5e-17 | 46 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-17 | 44 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 9e-18 | 44 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 9e-18 | 44 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 7e-18 | 44 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 2e-17 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_004633521.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 1e-36 | 56 |
| fliP | YP_004633521.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 3e-40 | 55 |
| fliP | YP_004633521.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 2e-33 | 49 |
| fliP | YP_004633521.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 1e-28 | 49 |
| fliP | YP_004633521.1 | flagellar biosynthetic protein FliP | VFG0394 | Protein | 2e-19 | 46 |
| fliP | YP_004633521.1 | flagellar biosynthetic protein FliP | VFG0188 | Protein | 1e-20 | 46 |
| fliP | YP_004633521.1 | flagellar biosynthetic protein FliP | VFG0519 | Protein | 4e-18 | 44 |
| fliP | YP_004633521.1 | flagellar biosynthetic protein FliP | VFG0044 | Protein | 5e-18 | 44 |
