Gene Information

Name : glnA (OCA5_c21170)
Accession : YP_004633062.1
Strain : Oligotropha carboxidovorans OM5
Genome accession: NC_015684
Putative virulence/resistance : Virulence
Product : glutamate-ammonia ligase GlnA
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 2305823 - 2307232 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGAAGACCGCCCAAGACGTCCTGAAGGCCATCAAGGACAACGACGTGAAGTACGTCGACCTGCGTTTCACCGATCCGCG
GGGCAAGTGGCAGCACGTCACCTTCGACGTCTCGATGATCGACGAGGAAATCTTCACCGAAGGCACGATGTTCGACGGCT
CCTCGATCGCCGGCTGGAAGGCCATCAACGAGTCCGACATGACGCTGATGCCCGACCCGGTGACCGCGACAATCGACCCG
TTCTTCGCCGAGACCACGATGGTCATCACCTGCGACATTCTCGAGCCGTCGACCGGCCAGCCCTACAACCGCGATCCGCG
CGGCATCGCCCGGAAGGCCGAGGCGATGGTGAAGTCGATGGGCATCGGCGACACCGTCTATGTCGGCCCCGAAGCCGAGT
TTTTCGTGTTCGACGACGTGCGCTTCCAGACCACGCCCTACAACACCGGCTTCAAGCTCGACTCCTCGGAGCTTCCGACC
AATTCCGACACCGAATATGAGGGCGGCAACCTCGGCCACCGCATCCGCACCAAGGGCGGCTACTTCCCGGTGCCACCGCA
GGATTCGATCCAGGACATGCGCTCCGAGATGCTCGGCGCCATGGCCCGCATGGGCGTGAAGGTGGAGAAGCATCACCACG
AGGTCGCTTCCGCCCAGCACGAGCTCGGCATGAAGTTCGACACGCTGACCCACATGGCCGACCAGATGCAGATCTACAAG
TACTGCATCCATCAGGTCGCGCACATCTACGGCAAGACCGCCACCTTCATGCCGAAGCCGGTCTATGGCGACAACGGCTC
GGGCATGCATGTGCACCTGTCGATCTGGAAGGACGGCAAGCCTACCTTCGCCGGCAACAAGTATGCCGACCTGTCGGACA
CCTGCCTCCACTACATCGGCGGCATCATCAAGCACGCCAAGGCGATCAACGCCTTCACCAACCCGTCCACCAACTCCTAC
AAGCGTCTGGTGCCGGGCTATGAGGCTCCCGTGCTGCTCGCCTATTCGGCGCGCAACCGCTCGGCGTCCTGCCGCATCCC
CTACACGACGTCGCCGAAGGCAAAGCGCGTCGAGGTGCGCTTCCCCGATCCGACCGCCAATCCGTATCTCGCTTTCGCGG
CGATGCTGATGGCCGGCCTCGATGGCATCAAGAACAAGATCGATCCGGGCCCGGCGATGGACAAGGACCTTTACGATCTG
CCGAAGGAAGAGCTGAAGCAGATCCCGACCGTGTGCGGCTCGCTCCGCGAGGCGCTTGAGAACCTCGACAAGGACCGCGC
ATTCCTGAAGGCCGGCGGCGTGTTCGACGACGACTTCATCAACAGCTTCATCGAACTCAAGATGACCGAGGTCGAGCGCT
ACGAGATGACCCCTCATCCGGTCGAGTTCGAGCTTTACTACTCGCTGTAA

Protein sequence :
MKTAQDVLKAIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEEIFTEGTMFDGSSIAGWKAINESDMTLMPDPVTATIDP
FFAETTMVITCDILEPSTGQPYNRDPRGIARKAEAMVKSMGIGDTVYVGPEAEFFVFDDVRFQTTPYNTGFKLDSSELPT
NSDTEYEGGNLGHRIRTKGGYFPVPPQDSIQDMRSEMLGAMARMGVKVEKHHHEVASAQHELGMKFDTLTHMADQMQIYK
YCIHQVAHIYGKTATFMPKPVYGDNGSGMHVHLSIWKDGKPTFAGNKYADLSDTCLHYIGGIIKHAKAINAFTNPSTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPYTTSPKAKRVEVRFPDPTANPYLAFAAMLMAGLDGIKNKIDPGPAMDKDLYDL
PKEELKQIPTVCGSLREALENLDKDRAFLKAGGVFDDDFINSFIELKMTEVERYEMTPHPVEFELYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-109 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_004633062.1 glutamate-ammonia ligase GlnA VFG1399 Protein 3e-109 53