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Name : pss (OCA5_c19090) Accession : YP_004632862.1 Strain : Oligotropha carboxidovorans OM5 Genome accession: NC_015684 Putative virulence/resistance : Virulence Product : exopolysaccharide production protein Pss Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG2148 EC number : - Position : 2057249 - 2058007 bp Length : 759 bp Strand : - Note : - DNA sequence : ATGGTTTCGACTGCTACGGCACGTTACGAGAATCAGGACAGCAACGTCGCGTCTCTGTGGAAAAACAGACGCTTTATCTC GGCGCGCCCGGTCGAATATGTCGGCCATGGCGCGTACAGGAAGAAACATTCGGTGCGGTTGTCACGGCGGGAACCCGCCG CGGCCTTCTCAAAGCGCGCGTTCGACATCACCGCCGCGAGCCTTGCGCTGTTGTTCTTCGCGCCGATGCTGATCGCGATC TCGATTGCGATCAAGGCGAGTTCGCCGGGGCCGATTCTGTTTCATCAGTATCGCTATGGCTACCGCAACCGCCGCTTCAA GATTTACAAGTTCCGCTCGATGCGCACCGACACCGGCGATCGCAGCGGTATCAGGCAGACGGTGCAGGGCGATCCGCGCG TCACGCGGGTCGGACGCATCCTGCGCAAGACCAGCCTGGATGAAATTCCGCAGCTCATCAACGTCATCAAAGGCGACATG TCGCTGGTCGGCCCGCGGCCGCATGTGCCGGGCATGCTGGCTGCCAACGTCCTCTACGAGGATCTGGTGCCCTATTACTT CCAGCGTCACATCGCGCGCCCCGGCATCACCGGCCTTGCGCAGGTGAGCGGCTGCCGCGGCAGCACCGCGGAAGCAGGCA GTGCGATTTCGCGGATCGATTACGACCTCGAATATATCGAGAACTGGTCGTTGCGGATGGATGTCATCATCATCCTGCGC ACGATACGCCGCGAGTTCATCTCCGGCAGCGGCTACTGA Protein sequence : MVSTATARYENQDSNVASLWKNRRFISARPVEYVGHGAYRKKHSVRLSRREPAAAFSKRAFDITAASLALLFFAPMLIAI SIAIKASSPGPILFHQYRYGYRNRRFKIYKFRSMRTDTGDRSGIRQTVQGDPRVTRVGRILRKTSLDEIPQLINVIKGDM SLVGPRPHVPGMLAANVLYEDLVPYYFQRHIARPGITGLAQVSGCRGSTAEAGSAISRIDYDLEYIENWSLRMDVIIILR TIRREFISGSGY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1N | AAL26667.1 | type 8 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-23 | 44 |
| SSP0070 | YP_300160.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 2e-23 | 43 |
