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Name : serS (OCA5_c17680) Accession : YP_004632723.1 Strain : Oligotropha carboxidovorans OM5 Genome accession: NC_015684 Putative virulence/resistance : Unknown Product : serine-tRNA ligase SerS Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1915974 - 1917293 bp Length : 1320 bp Strand : + Note : - DNA sequence : ATGCATGACATTCGCTGGATTCGCGACAACCCGGAGGCTTTCGACGCCGCGCTGGGCCGGCGCGGACTTGAGCCTCAGGC GGCCGCGCTGATCGCGCTCGACGAGAAGCGGCGCGGTGCGATTGCCGCTTTCGAGCAGGCGCAGGCGCGACGCAACGCAG CCTCGAAGGAAATCGGGGAAGCCAAGAAGGCGAAGGAGAACGCTCGCGCCGATGCGCTGATGGCGGAAGTGGGTGAGCTC AAGACCAAGCTGCCGGAGATGGACGCGGCAGCAAAAAGGCTTGAGGAAGATCTGCGCAAGGAGCTTGCACAGATTCCGAA CCTTCCGCTCGCCGAAGTACCGGAGGGCGCCGACGAGCACGGCAACGTGCAGCATCACGTCTATGGTGAGCCGCGCAGCT ATGCGTTCAAGCCGAAGGAGCATGTCGCGCTCGGCGAAGGTCTCGGCTTCATGGATTTCGAACGGGCCGCGAAACTCTCC GGGGCGCGCTTTGTCGTGCTGAAGAGCGGACTGGCGCGGCTCGAGCGCGCCATCGGTCAATTTTTCCTCGACGTGCATAC CGGCGAACACGGCTACACTGAAGTGAACCCGCCGCTGCTGGTGCGCGACGATGCGATGTTTGGCACCGCGCAGTTGCCGA AGTTTCGGGAAGATCAATTCGCGGCCGGATCGCTGGACGCCGAAGGGCAAGGCTATTGGCTCATTCCCACCGCTGAGGTC CCGCTGACGAACCTTGTGCGTGAATCGATCCTCGACGAGAAAGAATTGCCGATGCGCTTGACCGCGCTGACGCCGTGCTT CCGTGCGGAAGCAGGTGCAGCCGGGCGCGATACGCGTGGCATGATCCGCCAGCATCAGTTCACCAAGGTCGAACTCGTTT CGATCACGACGCCTGATGAATCCAGGAACGAGCACGAGCGCATGCTCTCCTGCGCGGAAGAAGTGCTGAAGCGGCTCGGC CTGCATTATCGCGTGATGACGCTGTGCACCGGCGATATGGGCTTCGCGTCACAAAAGACCTACGACATCGAAGTATGGAT GCCGGGACAAATATCGAGTCAGGGCGAAGGCGGTATGTACCGCGAAATTTCATCGTGCTCAGTGTGCGGCGACTTCCAGG CGCGGCGCATGGATGCGCGCTATCGCGGACCCGACAACAAGCCGCACTTCGTGCATACGTTAAACGGTTCGGGTACGGCG GTTGGCCGCGCGCTGATCGCGGTGATGGAAACCTATCAGCAGGAAGACGGGTCGATCGCGGTGCCGGATGTGCTGCAGCC TTACATGGGCGGTCTGAAAGTGATTGAGCGGGACCGCTGA Protein sequence : MHDIRWIRDNPEAFDAALGRRGLEPQAAALIALDEKRRGAIAAFEQAQARRNAASKEIGEAKKAKENARADALMAEVGEL KTKLPEMDAAAKRLEEDLRKELAQIPNLPLAEVPEGADEHGNVQHHVYGEPRSYAFKPKEHVALGEGLGFMDFERAAKLS GARFVVLKSGLARLERAIGQFFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFREDQFAAGSLDAEGQGYWLIPTAEV PLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPDESRNEHERMLSCAEEVLKRLG LHYRVMTLCTGDMGFASQKTYDIEVWMPGQISSQGEGGMYREISSCSVCGDFQARRMDARYRGPDNKPHFVHTLNGSGTA VGRALIAVMETYQQEDGSIAVPDVLQPYMGGLKVIERDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-94 | 49 |
