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Name : gabD (OCA5_c10270) Accession : YP_004631987.1 Strain : Oligotropha carboxidovorans OM5 Genome accession: NC_015684 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1091128 - 1092561 bp Length : 1434 bp Strand : + Note : - DNA sequence : ATGGCCTCCTATTCCGACACCCAGCTTTTCATCGACGGCCGCTGGCGCGACGGCAGCAAGCCGCGCCTGCCGGTGGTCAA TCCGGCAACGGAGGAGATGATCGGTACGCTCGCCCATGCCGGGCAGGCCGATCTCGATGAGGCGCTCGCGGCCGCGCAGC GTGGCTTCGAGGTATGGCGGCGAACCGGTGCGCTGGAGCGCTCCAAGCTGATCCGCCGCGCGGCGGAGATATTGCGCGGG CGGATTGATACCATCGCCACGTTGATGACGCTGGAGCAGGGCAAGCCGCTCGTCGAATCCCGCGCGGAGGCGACCGGTGC CGCGGACACCATCGAGTGGTTCGCGGAAGAAACGCGCCGCACCTACGGTCGCATCGTCCCGGCACGGGCCATGAACGTCA CGCAGATGGTGGTGAAGGAGCCGGTCGGCGTCGCCGCCGCTTTCACGCCGTGGAATTTCCCGCTCAATCAGGCGGTGCGC AAAGTCTCCGCCGCGCTTGCTGCGGGCTGCTCGATCATTTTGAAGGGACCGGAAGAAACGCCCGCGAGTTGTGCCGCGTT GATCGACGTGTTCGCGGAAGCCGGCATCCCGGATGGCGTGGTGAATATCGTGTTCGGCGTGCCCGCGGAAATTTCCTCGT ATCTGATCCCGCATCCGATCATCAAAAAGATTTCGTTTACCGGTTCGACTGTCGTCGGCAAGCAGCTTGCGGCGATGGCG GGCAGCCATATGAAGCGCGTCACCATGGAGCTCGGCGGTCATGCGCCCGCGCTGGTGTTCGACGATGCGGACGTGGCGCA CGCCGTGAAGATTCTTGCGGCGAACAAGTTTCGCAACGCCGGGCAGGTCTGCGTCGCGCCGACGCGCTTTCTGGTGCAGG ACAAGGTCTACGAGGATTTCCTCACGGGCTTCGTGGAGACTGCGGAAAACGTCAAGGTCGGTGACGGCATGGAGAAGGGT ACCCGGATGGGGCCGCTTGCCAACAGCCGACGCCTCGAAGCGATGGAAGCGCTCGTTGCGGATGCGACCTCGCGCGGTGC GAAGGTCGCCACCGGTGGCGAGCGGATCGGCAACCGCGGTTATTTCTTCAAACCGACGGTGCTGACGGAGGTGCCGCTGT CGGCGCGGGTCATGAACGAAGAGCCGTTCGGCCCTGTCGCGCTCATCAGCCGCTTCTCTGATTACGACAAGGCGATTGCC GAAGCCAACCGCCTGCCGTACGGGCTTGCCGCCTATGCCTACACGACATCGGCGAAGACGATGGCCAATCTCGGTCGTGA TATCGAAAGCGGCATGGTCAGTATCAACCACCATGGCATTGCGCTGCCGGAATTGCCGTTCGGCGGCATCAAGGATTCCG GTTACGGCTCCGAGGGTGGTATCGAAGCCGTCGAAGCCTACCTCAACACTAAGCTGGTGACGCAGGCGATATAA Protein sequence : MASYSDTQLFIDGRWRDGSKPRLPVVNPATEEMIGTLAHAGQADLDEALAAAQRGFEVWRRTGALERSKLIRRAAEILRG RIDTIATLMTLEQGKPLVESRAEATGAADTIEWFAEETRRTYGRIVPARAMNVTQMVVKEPVGVAAAFTPWNFPLNQAVR KVSAALAAGCSIILKGPEETPASCAALIDVFAEAGIPDGVVNIVFGVPAEISSYLIPHPIIKKISFTGSTVVGKQLAAMA GSHMKRVTMELGGHAPALVFDDADVAHAVKILAANKFRNAGQVCVAPTRFLVQDKVYEDFLTGFVETAENVKVGDGMEKG TRMGPLANSRRLEAMEALVADATSRGAKVATGGERIGNRGYFFKPTVLTEVPLSARVMNEEPFGPVALISRFSDYDKAIA EANRLPYGLAAYAYTTSAKTMANLGRDIESGMVSINHHGIALPELPFGGIKDSGYGSEGGIEAVEAYLNTKLVTQAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-79 | 42 |
