Gene Information

Name : CULC22_00822 (CULC22_00822)
Accession : YP_004629454.1
Strain : Corynebacterium ulcerans BR-AD22
Genome accession: NC_015683
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 886837 - 887523 bp
Length : 687 bp
Strand : +
Note : ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGATGACCCAACCGGCAGTATTAGTTCTGGATAATATCGGCAAAATTCATGATGACGGTTCTCGGACAACGACGACTCT
CGATTCGGTGTCGCTTACAGTAGAAGCCGGCGAGCTCGTCGCAGTTATGGGCCCGTCAGGGGCGGGAAAATCGACGCTTC
TTAATATTGCAGGGACCTTGGACACTCCTACTCGCGGGCGCGTGCTTATCGACGGCTGCGACACCAGCGGATTCAGCGCC
AAAGAACGCGCCCGCGTGCGACGCGAATCCGTCGGCTTTGTCTTCCAGGACTTCAACCTCATTCCAACTCTTACCGCCTC
CGAAAACGTGGGCCTCCCGCTTGAACTCAGCGGCATGACTAGGAAGGAGTGTGAGGCACAAGCTGCCGCAGCTTTGGAAG
CCATCGGCCTTCCTAGCGCGGGCGACTCCTTCCCGGCGGAGCTCTCAGGCGGCGAACGCCAACGTGTTGCCATCGCACGT
GCTCTCATCGGCGATCGTCGATTATTGCTTGCCGACGAGCCCACCGGCGCCCTAGACACCACCACCGGAGAAGCCATCAT
GGCTGTGCTGCGGTCGCGCATTGACCAAGGCGCAGCTGGCCTCCTAGTGACGCACGAGCCGAGGTTTGCCGCATACGCAG
ATCGCACGGTGTATTTGCGTGACGGACGATTGCAGGGGGATCAATAG

Protein sequence :
MMTQPAVLVLDNIGKIHDDGSRTTTTLDSVSLTVEAGELVAVMGPSGAGKSTLLNIAGTLDTPTRGRVLIDGCDTSGFSA
KERARVRRESVGFVFQDFNLIPTLTASENVGLPLELSGMTRKECEAQAAAALEAIGLPSAGDSFPAELSGGERQRVAIAR
ALIGDRRLLLADEPTGALDTTTGEAIMAVLRSRIDQGAAGLLVTHEPRFAAYADRTVYLRDGRLQGDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-30 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-30 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-30 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-25 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CULC22_00822 YP_004629454.1 hypothetical protein NC_008702.1.4606598. Protein 1e-31 51
CULC22_00822 YP_004629454.1 hypothetical protein NC_012469.1.7686878. Protein 3e-38 48
CULC22_00822 YP_004629454.1 hypothetical protein NC_012469.1.7685735. Protein 5e-32 44
CULC22_00822 YP_004629454.1 hypothetical protein CP001581.1.gene798.p Protein 2e-26 41