Gene Information

Name : fagA1 (CULC22_00041)
Accession : YP_004628681.1
Strain : Corynebacterium ulcerans BR-AD22
Genome accession: NC_015683
Putative virulence/resistance : Virulence
Product : integral membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 42401 - 43468 bp
Length : 1068 bp
Strand : -
Note : ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
ATGGTTTCGACCGCCACATCCAGTTCTAACCCGCACCGCAGTTTCTTTGTGAAGCATCCACGCAACACACAACGAACGCG
CCGACCGTTAATCGCCGTAGTAGTGCTACTTGCAGTATTACTCGTAGCGGTAAGCGTCGTAAGCGTCATGGTCGGCGCGA
GGCTTATCCCTCTCCCCGAGATCATCAACGCCATCCTCCACCCGGATCCCACTAATGTGTCTTCCACGATTGTGTGGGAT
AGGAGAATCCCCCGCACCCTCCTTGCTATTGTCGCCGGCATGTCTCTTGGCCTGGCTGGAACGCTCTCGCAAGCACTCAC
ACGCAATCCACTGGCAGACACCGGAGCATTGGGCATTAACTCGGGTGCTGCTTTTGCCATCGTGGTAGGCATCGCTCTGT
TTGGCGCGTCTTCCTCGTGGGTGTTCTTAGCGCTAGCTCTCGCGGGAGCGTGTGCCGCCGCGGCGGTGGTGTACTCGGTG
GGCACTCATCGCTCAGCAACGGCAGACCCGGTCCGGTTGGTTCTAGCCGGTGTGGCCCTGAGTGCGATTCTTTCCGGAAT
CGGCGAGGGACTCTCTCTGGTTAACCCCCAGGCCTTTGACCGGTTAAAGAGCTGGATGGTGGGAAGCGTGGACGTCGGCA
CGCTTACGCCTCTAGGCATCGCTGGCGCTGGTCTTGCGTGCGGCGTTGTTCTCACGATCACGTGCGCTCATGGGCTTAAT
GCGCTGGCTTTGGGCGACGCCATGGCTACATCCATCGGCGCATCCACCGCACGCATCCGTTTTATTTCCTTTATCGCTGT
AGTCATCCTCGCGGCCAGCGCTACTGCCGCAGCCGGAGTCATTATCTTCCTTGGACTTATGGTTCCCCACGTTGCGCGAT
GGATCGTGGGACCAGACCTCCCCCGGGTGCTCACCACGTCCCTTCTTCTCGGGCCGCTTGTTCTTGTTGTAGCGGATATT
ATTGGTCGCCTGATCGTTCCCGGTGAGTTTCCCGCGGGAGTGGTTGTGTCCTTTATTGGTGCGCCGTTCCTCATTGCATA
TGCCCAAAGCAGGAAGGGGGAAATGTGA

Protein sequence :
MVSTATSSSNPHRSFFVKHPRNTQRTRRPLIAVVVLLAVLLVAVSVVSVMVGARLIPLPEIINAILHPDPTNVSSTIVWD
RRIPRTLLAIVAGMSLGLAGTLSQALTRNPLADTGALGINSGAAFAIVVGIALFGASSSWVFLALALAGACAAAAVVYSV
GTHRSATADPVRLVLAGVALSAILSGIGEGLSLVNPQAFDRLKSWMVGSVDVGTLTPLGIAGAGLACGVVLTITCAHGLN
ALALGDAMATSIGASTARIRFISFIAVVILAASATAAAGVIIFLGLMVPHVARWIVGPDLPRVLTTSLLLGPLVLVVADI
IGRLIVPGEFPAGVVVSFIGAPFLIAYAQSRKGEM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-109 90
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-109 90
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-109 90
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-109 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fagA1 YP_004628681.1 integral membrane protein VFG0926 Protein 4e-34 46