Gene Information

Name : fagB (CULC22_00040)
Accession : YP_004628680.1
Strain : Corynebacterium ulcerans BR-AD22
Genome accession: NC_015683
Putative virulence/resistance : Virulence
Product : integral membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 41415 - 42401 bp
Length : 987 bp
Strand : -
Note : ABC-type Fe3+-siderophore transport system, permease component

DNA sequence : 
ATGATCCACCGCCGTTCCCTCTATACCGTGCTCATTCTGGCGTTGCTGCTGGTTCTCTCTGCAGCAGTGGCTGTTTCTCT
GCCTGGCGCGGGCATCACCACCGCCAAAGTCTGGTCTGTTTTCCAAGGCAATGAATCTGGCCTTGCTCATACCATCGTCT
TTTCTTGGCGAGCCCCGCGAATCGTCACAGCTCTCCTTGTCGGCGCCGCTTTAGGCATCGCAGGATCACTCTTCCAGGCT
TTAACCCGAAACCCGCTGGGTTCTCCCGACATTATTGGCTTTAATACCGGCGCCTACACTGGGGTCATTCTCACCATGAT
GGCGGGCATGACCGGTTTCGCTTCCGTCGCTTTCGGCGCTCTCGTCGGCGGCTTAGCCACGGCCCTCGCGGTCATGGCGT
TCTCCGTCCGCGTGCGTATCGACGGCCTCCGCATCATCCTGGTCGGCCTTGGCATTTCTGCAATGCTCTCGGCGTTCAAC
CGCTGGCTTATCACCCGTGGCGACCTCAACACCGCAATGTCCGCCGCCAGTTGGGGCGCCGGAACTCTCAACGGAATCCG
TTGGTCCGCAGCCACCCCTGCTGTCATAGCGCTGGCCGTTATCGTGGCACTTGCCCTACTCCTAGGATCGCGCATTGACA
TCCTCAATCTCGGCGACGATACCGCCACGGCACTGGGGCTGCCGGTCAACCGCAGCAAGCTCGTGTTGTTGGTCGTCGGA
GTCCTCCTCGTCGCGATCACAACCGCCATCGCCGGGCCTATTTCTTTTATCGCGCTGGCCGCTCCACATATCGCACAACG
CATTACTGCCAGCCCCCGCACTCCTTTATTAGTCTCTGCGCTCACCGGAGCGACGCTGCTCCTTGTTGCAGACATCATCG
CCCAGCGGGCATTCTCCCCCGTTCAACTTCCCGTGGGACTAGTCACCGTGGTTATCGGCGGCATTTATCTACTCACGCTC
ATCGCCTCAGCTTCTCGACGCGCCTAA

Protein sequence : 
MIHRRSLYTVLILALLLVLSAAVAVSLPGAGITTAKVWSVFQGNESGLAHTIVFSWRAPRIVTALLVGAALGIAGSLFQA
LTRNPLGSPDIIGFNTGAYTGVILTMMAGMTGFASVAFGALVGGLATALAVMAFSVRVRIDGLRIILVGLGISAMLSAFN
RWLITRGDLNTAMSAASWGAGTLNGIRWSAATPAVIALAVIVALALLLGSRIDILNLGDDTATALGLPVNRSKLVLLVVG
VLLVAITTAIAGPISFIALAAPHIAQRITASPRTPLLVSALTGATLLLVADIIAQRAFSPVQLPVGLVTVVIGGIYLLTL
IASASRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-96 93
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-97 93
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 4e-97 93
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-97 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fagB YP_004628680.1 integral membrane protein VFG0928 Protein 7e-38 48