Gene Information

Name : fagC (CULC22_00039)
Accession : YP_004628679.1
Strain : Corynebacterium ulcerans BR-AD22
Genome accession: NC_015683
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 40540 - 41406 bp
Length : 867 bp
Strand : -
Note : ABC-type sugar transport systems, ATPase components

DNA sequence : 
ATGCATACACCCAACATCTCCTCCACAGACTCGTCTCCTGCAGCCAACGCTTCCACAGCCACTAGCTCCGCGCTTCGCAC
AGAAAATGTCACCCTCAGCTGGGATAAGCACGTGGTGAGCACCAACCTAAGCGTCGATATCCCCGCAGGAAAGTTCACGG
CAATCATCGGCCCTAACGGATGCGGAAAATCAACGTTGCTTAAAAGCTGCGCCCGCATTCTTGCCCCAGATACTGGCTCT
ATGTATCTCCACGGGCACGACCTCACCCACCTGCACACCAAGGAAATAGCCAAGCAACTCGCACTTCTTCCCCAGAGCAC
CATCACCCCCGCCGACATCACCGTAGAAGAGCTCGTCCGCCGCGGGCGATTCCCCCACCACAATTGGTTGCATCAATGGA
CCAAGGAAGACACTCGGGCCGTCGATGCCGCGCTCAGTGCCGCCAGCGTGAAAGAACTCACACACAAGCGCGTCACTGAT
TTATCTGGTGGTCAGCGCCAGCGCGTGTGGCTTGCCATGGTTCTCGCCCAGAACACCCCTACGGTGCTTCTCGACGAACC
CACCACCTTCCTAGACATCGCCCACCAGTACCAGCTCCTTGAGCTAGCGCGTTCCCTGACAACCCAGCTCAATCGCACTG
TCGTCGCGGTACTCCACGATCTCCAGCAAGCCGTCCGCTACGCCGACCATCTGATTGTTATGAAAAATGGAAGCGTTATA
GCCACAGGATCACCCAAAGACGTGATCAGTGCAGAGCTCATATCCGAGGTCTTTAACATCACCGTTCGTACCACGCTTAT
CGACGACCAACTCATCGTCATCCCAACCGAATTGCCAGTGCCAAACGTCGCAATAATGCAGGACTAG

Protein sequence : 
MHTPNISSTDSSPAANASTATSSALRTENVTLSWDKHVVSTNLSVDIPAGKFTAIIGPNGCGKSTLLKSCARILAPDTGS
MYLHGHDLTHLHTKEIAKQLALLPQSTITPADITVEELVRRGRFPHHNWLHQWTKEDTRAVDAALSAASVKELTHKRVTD
LSGGQRQRVWLAMVLAQNTPTVLLDEPTTFLDIAHQYQLLELARSLTTQLNRTVVAVLHDLQQAVRYADHLIVMKNGSVI
ATGSPKDVISAELISEVFNITVRTTLIDDQLIVIPTELPVPNVAIMQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-119 91
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-119 91
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-119 91
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-119 91
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-56 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-56 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fagC YP_004628679.1 ABC transporter ATP-binding protein BAC0164 Protein 2e-56 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fagC YP_004628679.1 ABC transporter ATP-binding protein VFG0925 Protein 1e-62 50
fagC YP_004628679.1 ABC transporter ATP-binding protein VFG1042 Protein 2e-56 50