Gene Information

Name : CULC22_02288 (CULC22_02288)
Accession : YP_004630909.1
Strain : Corynebacterium ulcerans BR-AD22
Genome accession: NC_015683
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2526453 - 2527136 bp
Length : 684 bp
Strand : -
Note : ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGATTCCCGTTCTTTCCCTTAAAAAAGCCAGTGTTGTCTATCCTGATGGCTCGTCTACGGTTACGGCTTTGGATGCCGT
TGACCTAGAAGTTCACTCTGGTGAGCTGCTCGCGCTAGTGGGTGAGTCTGGTTCCGGTAAGTCCACGTTGCTCTCTGTAG
CGGGTGCGCTTCAAACTCCGACGTCCGGCACAGTAACAATCGCAGGTCAAGACGTCCGCGATCTAGATGATGAGGGTCGT
GCGAAGTTGCGCCGTGAGGAGATCGGTTTTGTTTTCCAGCAGGCGAACCTTCTGGGCTCGTTGAACGCCCGGGAACAGCT
TTTGGTAACAGATCACGTTCGCGGTATACGAGGTGCAGAGCTGCGAGCTCGTTATGATCGTGCGGATGAGTTGCTGGCGC
GTGTGGGCCTTGAAGGCAAGGAGACCCGTCGAATTGCGCAACTTTCTGGTGGTCAGCGCCAGCGCGTGAACATTGCGCGT
GCACTCATGGGAAACCCCTCACTATTGCTTGCCGACGAACCCACCTCCGCACTAGATCGTCGCATGAGCGTGGAGATCGT
GACTTTGCTTTCTGAGATCACTAAAGAGTTTGACGTGGCCACAGTGATGGTGACCCACGATCTGAGCCAGCTCTCCTACG
CTGATGCCGTCGTGGAGCTTATCGACGGTGCCCGTAAAGAGTAA

Protein sequence : 
MIPVLSLKKASVVYPDGSSTVTALDAVDLEVHSGELLALVGESGSGKSTLLSVAGALQTPTSGTVTIAGQDVRDLDDEGR
AKLRREEIGFVFQQANLLGSLNAREQLLVTDHVRGIRGAELRARYDRADELLARVGLEGKETRRIAQLSGGQRQRVNIAR
ALMGNPSLLLADEPTSALDRRMSVEIVTLLSEITKEFDVATVMVTHDLSQLSYADAVVELIDGARKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CULC22_02288 YP_004630909.1 hypothetical protein NC_008702.1.4606598. Protein 3e-26 45
CULC22_02288 YP_004630909.1 hypothetical protein NC_012469.1.7686878. Protein 2e-34 42
CULC22_02288 YP_004630909.1 hypothetical protein CP001581.1.gene798.p Protein 2e-34 41