Gene Information

Name : srtB (CULC22_02107)
Accession : YP_004630731.1
Strain : Corynebacterium ulcerans BR-AD22
Genome accession: NC_015683
Putative virulence/resistance : Unknown
Product : fimbrial associated sortase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3764
EC number : -
Position : 2295327 - 2296193 bp
Length : 867 bp
Strand : +
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGAACCAAAAGCTAGGCAGAATCACCACCAACCCTCAATCACGAAAAAAAGGAAATGCAGCGCTAGCTGTACTTATCAT
CCTTGTCGGATTGGGAGTACTCCTCTACCCTGTCATCGCAACGCAATGGAATAACATCATCCAGCAGCAAGCCGCAGATG
CTTATTCCAAGTTAGAAAAGAGCGTTCCTACAGAAGTTCTTGATACGGCTTGGGAAGAAGCCCACCGTTACAACGCCGAG
AGATCTCAAGGCCCCATCTTGGATGCGTGGGCTTCACGCCGAGCAAAGGATAACGAGCCATACCAGGAATACCTTCATAA
ACTCCATGAAACCGATGCTATGGGACGCATTATCATCCCTTCCATTAAGTCGGATTTACCTATTTACCACGGAATTTCAG
AGGACTCTTTGCAGCGTGGCGTCGGCCATCTGTACGGAACCGACTTACCAGTGGGAGGCGTCGATCGGCACTCTGTGCTT
TCTGCGCATACCGGACTACAGAACGCTACGTTGTGGGACAACCTGAACAAGGTCAAAGAAGGCGATGCCTTCTATATTGC
CGTGGCCGGACACAAACTTAAGTATCAAGTTGATCGCATAAGTGTGGTCCTGCCTGAGGAGACAGATGCGCTCCAAAGAG
TTGAAGGGCAAGACCTCATCACTTTGGTCACGTGTACACCGTACGGAATCAACACACACCGCCTTCTCGTGCAAGGCCAT
CAAGTCCCCATGGATCCGCAGGAAGAAAAAGTGTTTGAAGAGGGCTCAGGAATGAACATGCAGTGGTGGATGTGGGCAAT
TCTTGCAGCTGCCGTTCTCACTATTGTTTTGCTCATCGTTTGGTGGCGCAAAAACTTTAGTAAGTAA

Protein sequence :
MNQKLGRITTNPQSRKKGNAALAVLIILVGLGVLLYPVIATQWNNIIQQQAADAYSKLEKSVPTEVLDTAWEEAHRYNAE
RSQGPILDAWASRRAKDNEPYQEYLHKLHETDAMGRIIIPSIKSDLPIYHGISEDSLQRGVGHLYGTDLPVGGVDRHSVL
SAHTGLQNATLWDNLNKVKEGDAFYIAVAGHKLKYQVDRISVVLPEETDALQRVEGQDLITLVTCTPYGINTHRLLVQGH
QVPMDPQEEKVFEEGSGMNMQWWMWAILAAAVLTIVLLIVWWRKNFSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-77 69
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 7e-75 66
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 9e-63 57
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 3e-69 57
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-55 50
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 8e-51 46
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-38 46