Gene Information

Name : ciuD2 (CULC22_01561)
Accession : YP_004630190.1
Strain : Corynebacterium ulcerans BR-AD22
Genome accession: NC_015683
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 1732803 - 1733750 bp
Length : 948 bp
Strand : -
Note : ABC-type sugar transport systems, ATPase components

DNA sequence : 
GTGGTTGGTGTGGAAGGAATCCCAAAAATTTCGTCGAGATCGACCGAGAAAGTGATCGCTGATATGTCCGCAACCCCTCC
TAACCGCAAACACTGGGACACCTCGACCTCCGACACCGTTGCAACCGAACTGGGCGAGCGAGGACAGACAGACGGACTGC
GCGTGGAGGCCCGAGGCTTGCAGATCGGGTACGCGCCCGGTGAATTTGTGGTCGACGGGCTAGACCTCACCGCAGAGCCG
GGCACAGTAACAACCCTGCTGGGGCCGAATGGCTGCGGTAAATCTACCGTGCTGAAGTCGCTGAGCCGCGTGCTCACCCC
ACAGGGTGGAACCGTGACAGTTGGCGGACACAATGTGCATCGCCTGCCCCCACGCGAGGTTGCGCGGATGATCGGGATGC
TGCCGCAATCGCCGCTGTGTCCCCAAGGGCTCACCGTCGGTGAACTCGTGGCGCGCGGCCGGCATCCGCACCAACGTCGC
TGGATGCGACAATCGGAGAAGGATCGTCAGGCCATTGGCCAGGCTTTAGAGCACACCAACACCGCCGCTTTGGTGGATTG
CGACGTTTCCGAGCTCTCAGGTGGCCAGCGCCAGCGGGTGTGGATGGCCATGGTTGTGGCACAGGAAACTCCGGTGGTGC
TCCTGGACGAGCCCACCACGTACTTAGACCCAGCTCACGCCATCGACATACTGAAGCTGGCCAAAGACCTGGCCTCTCAA
GGCAAAACGGTCATCATGGTGTTGCATGACCTCATGCTGGCCGGAACGTATAGCGACCGGCTGGTGCTGCTCAAGGCGGG
TGAGATCGTGGGCCAGGGTAGTGCCACAGAAGTGCTTACCCAGGAAAAACTTGCTCAATGCTACGGCCTGCGCGCCGAAG
TATGGGAAGACCCACGGGGGCAAGCGCCCGTTATCGTGCCACGCGGAACGATACACCTGAACGAATAG

Protein sequence : 
MVGVEGIPKISSRSTEKVIADMSATPPNRKHWDTSTSDTVATELGERGQTDGLRVEARGLQIGYAPGEFVVDGLDLTAEP
GTVTTLLGPNGCGKSTVLKSLSRVLTPQGGTVTVGGHNVHRLPPREVARMIGMLPQSPLCPQGLTVGELVARGRHPHQRR
WMRQSEKDRQAIGQALEHTNTAALVDCDVSELSGGQRQRVWMAMVVAQETPVVLLDEPTTYLDPAHAIDILKLAKDLASQ
GKTVIMVLHDLMLAGTYSDRLVLLKAGEIVGQGSATEVLTQEKLAQCYGLRAEVWEDPRGQAPVIVPRGTIHLNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-53 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-46 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-45 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-45 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-45 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-45 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-44 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-45 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-45 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-45 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ciuD2 YP_004630190.1 iron ABC transporter ATP-binding protein BAC0164 Protein 1e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ciuD2 YP_004630190.1 iron ABC transporter ATP-binding protein VFG0925 Protein 1e-45 45
ciuD2 YP_004630190.1 iron ABC transporter ATP-binding protein VFG1042 Protein 9e-47 44