Gene Information

Name : xerD (CULC22_01040)
Accession : YP_004629669.1
Strain : Corynebacterium ulcerans BR-AD22
Genome accession: NC_015683
Putative virulence/resistance : Unknown
Product : tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1138812 - 1139744 bp
Length : 933 bp
Strand : +
Note : Site-specific recombinase XerD

DNA sequence :
ATGACGTCGCCCAAGACAGCCGCCGATCGCTGGTTAACGCATTTAGCCATCGAACGAGGAGTCAGCGCTAACACCCTGAG
TAACTATCGACGCGATGTGCAGCGGTATCTTGATTGGATCGCACATCGCGGCATCGATGATCTGAGCACTGTGACCTCGC
GAGATATTGAGTCCTATGTTCTTGACCTACGGCGAGGAGACCCGGATACGGGTAGGCCGCCTTTGGCTGCTTCGTCGACA
GGCCGTGCGCTTGTAGTTGCGCGGGGGCTTCATAAGTTTGCGTTGATGGAGGGTCTGATACCCGTTGACGTAGCTGGCGA
GGTTTCTCCTCCATCGACTGGGCGGCATCTGCCGGATACGCTGTCAATCGCAGAAATGGATGAGCTTATCGCTGCAATTC
CTACGGACGAGGTAGCTACCCCTGAGGATCTACGTGATGCCGCATTGATCGAACTGCTCTACGGCACTGGTGCTCGTATA
TCAGAAATCATGAATCTCACAGTGGATGAAGTGATGGTGCTGGAAGAAGCAGAAGGCATGTTGCGGATTGTAGGAAAAGG
GGATAAGCATCGTGTCGTTCCTGTTGGCTCGATGGCACAGAAAGCGTTACAACGCTACCTCGTACGGTCGCGGCCACAGC
TGACAAAAGGAAAGAGCCACGCGCTCTTTTTGAATAAACGTGGTGGGGCCTTATCTAGGCAAAGCGCGTGGCAAATACTC
AAGAATTCTGCTCGGAGAGCCGGAATACACAAAGATATTTCGCCTCATACGTTACGCCACAGCTATGCATCGCATCTTCT
TGAAGGCGGTGCGGATGTTCGTGTTGTTCAAGAACTTTTGGGACATTCATCCGTTACCACCACACAAATTTATACGCACG
TAACGGCAGATAATTTGCGTAATGTATGGGCGCAGTCGCATCCTAGGGCTTAA

Protein sequence :
MTSPKTAADRWLTHLAIERGVSANTLSNYRRDVQRYLDWIAHRGIDDLSTVTSRDIESYVLDLRRGDPDTGRPPLAASST
GRALVVARGLHKFALMEGLIPVDVAGEVSPPSTGRHLPDTLSIAEMDELIAAIPTDEVATPEDLRDAALIELLYGTGARI
SEIMNLTVDEVMVLEEAEGMLRIVGKGDKHRVVPVGSMAQKALQRYLVRSRPQLTKGKSHALFLNKRGGALSRQSAWQIL
KNSARRAGIHKDISPHTLRHSYASHLLEGGADVRVVQELLGHSSVTTTQIYTHVTADNLRNVWAQSHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-42 42
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-42 42