Gene Information

Name : TOPB45_0833 (TOPB45_0833)
Accession : YP_004627859.1
Strain : Thermodesulfobacterium geofontis OPB45
Genome accession: NC_015682
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase xerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 819342 - 820220 bp
Length : 879 bp
Strand : +
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; KEGG: toc:Toce_1271 tyrosine recombinase XerD subunit; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence : 
ATGAAAGAACTTATAGAAGAATTTCTAAGTTATCTTGCGGGTGTTAAAAATTATTCCTATAATACTTTACTGGCTTATCA
AGCTGATTTAAAAGATTTTGCAGATTTTTGTGGTTCTTTGCCCTCAGAAGAAGAAGCTTTTCAAAAACTAAGAGAATATT
TAGAAAATTTAAAAAAGAAAGGATATAATCCTTTTAGCATAGCAAGAAAGATTTCAAGTTTAAGAAGCTTTTTCAAATTT
TTAGAAGCAGAAAAGGGATTTAATATAAGTTTTCTTTTATTTTTAGAATCTCCCAAGTTACCTTTCAGACTCCCTAAGGT
ATTAAGTTTAGAAGAGATTGAAAAACTTTTAAATTCTCCTGATATAAATAATCCTCTTGGATATAGAGATAGAACCATGC
TTGAAGTGCTTTATGCTACAGGATTAAGGGTTTCAGAATTGGTAAATCTTAAATTTGAGAATTTAAATCTTGAGCTTGGT
TTAGTTAGAGTTTTAGGTAAGGGTTCTAAGGAAAGACTTGTCCCTCTCGGAGATTATGCTTTGAAGTTTTTAAAAACCTA
TTTAGAAAATGTGCGCCCCCAGTTGGCAAATGAAAAAAGTAAAAATTTTGTTTTTTTAAATAGAAGAGGAGCTCCTATTA
CGAGACAAAGATTTTGGCAGATAATAAAAGATTATGCCAAAAAATGCGGGCTTGAAGATAAAGTCACTCCTCATGTAATA
AGGCATTCCTTTGCAACACATCTTTTACAAGGAGGTGCAGATCTTAGGGCTTTACAAATGATGCTTGGGCATAGTAGTTT
AAGTACAACCCAAATCTATACTCATCTTGATTATAAAAAATTAAAAGAGGTCTATGAAAAACACCATCCCAGAGCTTAA

Protein sequence : 
MKELIEEFLSYLAGVKNYSYNTLLAYQADLKDFADFCGSLPSEEEAFQKLREYLENLKKKGYNPFSIARKISSLRSFFKF
LEAEKGFNISFLLFLESPKLPFRLPKVLSLEEIEKLLNSPDINNPLGYRDRTMLEVLYATGLRVSELVNLKFENLNLELG
LVRVLGKGSKERLVPLGDYALKFLKTYLENVRPQLANEKSKNFVFLNRRGAPITRQRFWQIIKDYAKKCGLEDKVTPHVI
RHSFATHLLQGGADLRALQMMLGHSSLSTTQIYTHLDYKKLKEVYEKHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-54 46
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-54 46