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Name : TOPB45_0054 (TOPB45_0054) Accession : YP_004627098.1 Strain : Thermodesulfobacterium geofontis OPB45 Genome accession: NC_015682 Putative virulence/resistance : Virulence Product : Fis family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 52879 - 53865 bp Length : 987 bp Strand : + Note : KEGG: sfu:Sfum_3765 two component sigma54 specific fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core DNA sequence : ATGTTTCTTTTAGAGACCCGAAATCCGCAAATGAAAAAAATTTATGAATTAGCAAAAAAAGTAGCTCCTTCTTCAAGTAC AGTTCTTATTCTTGGAGAATCAGGCACAGGAAAAGAAGTCTTAGCAAAATATATTCATTTTTGTAGTAAAAGAAAAGGTC CTTTTGTTCCTATAAATTGTGCTGCTATCCCAGAGGATCTTTTAGAAGCTGAACTTTTTGGATATGAAAAGGGAGCTTTT ACAGGAGCAATAAAAAGTAAACCAGGTAAATTTGAGCTTGCCAACCAAGGAACTATTTTTCTTGATGAAATAGGAGATTT AAGCCCTAAACTTCAAGCTAAACTTTTAAGAGTAATTCAAGAAAAACAAGTAGAAAGATTAGGTGGAGATAGAGCTATTA AGATTGAAGTAAGAATTCTTGCTGCAACTAATAAAGATTTGGAAAAGGAGGTTAAAGAAGGGAAATTTAAAGAAGATCTC TTTTTTAGATTAAATGTAATTCCTATAAGGCTCCCTCCTCTAAGAGAAAGGAAAGAAGATATCCCTTTATTAGTAAATTT TTTTTTGAAAAGATTATGTGAAAGAGAAGGAATAGAAGAAAAAACTATTACTCCTGAAGCCTTAGAAACTCTTATGAATT ATCATTGGCCAGGAAATATAAGAGAATTGGAAAATTTAATAGAAAGATTAGTGATACTCTCAGAAAATAATGTTATCGGA GTTGAAGATCTTTCTATGTCCTCGTTAGATTTAAAATTTGCTGTAAGAGATGAGTTAATTGAAAAAAAAGAGGTAGAGCT AAAATATACACTTCCTGAAATACCTGAAGAAGGAATTGAATTAAACAAACTTTTAAGGGAAATAGAAATATATTATCTAA AAAAATCTCTTGAAATATCAAAGGGAATCAAAACTAAAGCAGCTAAATTACTAGGATTAAACCGCACAACCTTTATAGAA AAACTTAAAAAATATAATTTGGTATAA Protein sequence : MFLLETRNPQMKKIYELAKKVAPSSSTVLILGESGTGKEVLAKYIHFCSKRKGPFVPINCAAIPEDLLEAELFGYEKGAF TGAIKSKPGKFELANQGTIFLDEIGDLSPKLQAKLLRVIQEKQVERLGGDRAIKIEVRILAATNKDLEKEVKEGKFKEDL FFRLNVIPIRLPPLRERKEDIPLLVNFFLKRLCEREGIEEKTITPEALETLMNYHWPGNIRELENLIERLVILSENNVIG VEDLSMSSLDLKFAVRDELIEKKEVELKYTLPEIPEEGIELNKLLREIEIYYLKKSLEISKGIKTKAAKLLGLNRTTFIE KLKKYNLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 1e-41 | 45 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 1e-41 | 45 |
| hrpS | ABQ88367.1 | HrpS | Virulence | Hrp PAI | Protein | 9e-40 | 42 |
| hrpS | AAA17650.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 9e-40 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TOPB45_0054 | YP_004627098.1 | Fis family transcriptional regulator | BAC0467 | Protein | 2e-64 | 45 |
