Gene Information

Name : TOPB45_0361 (TOPB45_0361)
Accession : YP_004627395.1
Strain : Thermodesulfobacterium geofontis OPB45
Genome accession: NC_015682
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 348089 - 348694 bp
Length : 606 bp
Strand : +
Note : PFAM: Bacterial sugar transferase; KEGG: hor:Hore_22910 undecaprenyl-phosphate galactose phosphotransferase

DNA sequence :
GTGAAAAGATATTTCATATTTAAGAGACTTTTTGATATATTTTTAGCATCTATTGGGCTTATTCTTTCTTTACCACTTTG
GCTTATTATTGCTATCGCAATTAAATTAGAAGATGGTGGCCCTATTTTTTATTCTCAAGAGAGAGTAGGTAAAGATGGTA
AAATATTTCGGATTTTAAAATTTCGCTCAATGATACCTGATGCTGAGAAACAAGCTTCAGTGGCGTGGACATTTGAGAAT
GATCCTCGAATAACTAAAGTTGGGAGATTTCTTCGTCGCACTGCCTTAGATGAATTGCCAAGTTTACTAAGTATACTCAA
AGGAGATATGAGTTTTGTTGGACCAAGAGCTCTGGCAGTTGAGGAGCAAAAGTTTCTTGAAAAAAAGATACCAGGCTTTG
AAAAAAGACTTGCAGTTTGCCCTGGACTTACCGGTCTTTCCCAAGTTTACAACCCAGAAGATGATCCTTATAAAAAATTA
AAATACGACTTAGAATACATAGAGAAAATGAGTTTTTGGCTTGATATAAAACTAATTTTACTTTCTTTTTATAATACCTT
TACGCTTCGCTGGGATAAAAGGATTGGTAAGAAAAGACAAGAATAA

Protein sequence :
MKRYFIFKRLFDIFLASIGLILSLPLWLIIAIAIKLEDGGPIFYSQERVGKDGKIFRILKFRSMIPDAEKQASVAWTFEN
DPRITKVGRFLRRTALDELPSLLSILKGDMSFVGPRALAVEEQKFLEKKIPGFEKRLAVCPGLTGLSQVYNPEDDPYKKL
KYDLEYIEKMSFWLDIKLILLSFYNTFTLRWDKRIGKKRQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-25 45
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TOPB45_0361 YP_004627395.1 sugar transferase VFG1369 Protein 8e-20 41