Gene Information

Name : TOPB45_0245 (TOPB45_0245)
Accession : YP_004627287.1
Strain : Thermodesulfobacterium geofontis OPB45
Genome accession: NC_015682
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 243613 - 244059 bp
Length : 447 bp
Strand : +
Note : KEGG: dak:DaAHT2_0073 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding

DNA sequence :
ATGAGCATAAACAAAGTTATTCTAATTGGTAGACTTGGAGCAGATCCAGAAATTAGATATACTCTTGATGGAAAACCGGT
AGCTACATTCAGAATAGCGACCAATGAAGTAATAATAAAAAACGGAGAAAAGGAGATTCTTACTGAATGGCATAGAATTG
TTGCTTTTGGAAGACTTGCTGAAATTTGTGGAGAATATTTATCTAAAGGAACTCAGGTTTACATAGAAGGGAAATTAAGA
ACAAGGAAATTTGAAGATAGACAGGGGAATCAAAGATATATCACTGAAATAGTAGCTAATACCCTTCAAATTCTTGAAAG
AAAATCTGCATCCAATTCCGAACCTAAGGAAATTCCTTCAATTCAAGGATTCAAAAATACTTTAGAAGAAGAACCTTTAG
AAGATTTAGAAGAAAACCTATTAGACGAAGAAGATATCCCCTTTTAA

Protein sequence :
MSINKVILIGRLGADPEIRYTLDGKPVATFRIATNEVIIKNGEKEILTEWHRIVAFGRLAEICGEYLSKGTQVYIEGKLR
TRKFEDRQGNQRYITEIVANTLQILERKSASNSEPKEIPSIQGFKNTLEEEPLEDLEENLLDEEDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 6e-26 53
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-15 41