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Name : TOPB45_0196 (TOPB45_0196) Accession : YP_004627239.1 Strain : Thermodesulfobacterium geofontis OPB45 Genome accession: NC_015682 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 187558 - 188544 bp Length : 987 bp Strand : + Note : SMART: Cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: dak:DaAHT2_1635 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core DNA sequence : ATGAAAGAAAAAGAAGTCCTTCTTGAAAGAGCTAAAGAAATTCTTCAAATAGAAAAATTAGGTCTTGAAGAGGTTTCTAA AAATTTAAATGATTCTTTTGTTCAAGCTTTAGAACTTATTTTAAACATTAAGGGAAGAGTAGTAGTTACAGGAGTAGGGA AAAGCGGAATTATAGGAAGAAAAATTTCAGCTACTCTTTCTTCTACAGGAACACCTTCTTTTTTCCTTCATCCAGTTGAA GCTCTTCATGGAGACTTAGGAATGGTCACCTCTGAGGATATTTTACTTGCTATCTCCTATTCTGGAAATACTCTCGAGGT TTGTGAACTTGCTTCTATTCTTAAAAAAAGAAATATCAAAATAATAAGTTTAACTGGAAATCCAGAAAGTAGATTAGCAA AACTTTCTGATATAATTATCAATACCAAAATTCCTAAAGAGGCTTGTCCTTTTAATCTTGCTCCTACTACAAGTACAACC GCCACTTTAGCTTTGGGGGACGCTTTAGCTATATGTCTTTTTGAATTAAAAGGCTTAGGTTCTGAAGATTTTAGAAAAAA TCATCCAGGAGGCTCCTTAGGGGAAAGATTAAAAGTAAAAGTAAAAGAGATTATGCTTACAGATGAAAAAATACCTGTAG TTTCTGAAGGTACTCTCTTAGAAGACGCTATAGTAGAAATTGATAAAAAACGATTAGGTTGTGTGCTTATTACCAATTCT TTAGGAATTCTTACAGGAATTATTACAGATGGTGATCTAAGGAGGATTTTTTTGAAGTATAAAACTTACAGTAACTTGAA AGTTGAGGAAGTAATGACAAGAAACCCTAAGGTAATCGAAGAAAATCGTTTAGCTTCAGAAGCTCTTGAAATGATGGAAA AATATCTTATTACGGTTTTACCTGTTATAAATTATGATCAAAAATTAGTAGGAATCTTACATCTTCATGATATTTTAGGA AAGGGGACATTTAAATTTACTATCTAA Protein sequence : MKEKEVLLERAKEILQIEKLGLEEVSKNLNDSFVQALELILNIKGRVVVTGVGKSGIIGRKISATLSSTGTPSFFLHPVE ALHGDLGMVTSEDILLAISYSGNTLEVCELASILKKRNIKIISLTGNPESRLAKLSDIIINTKIPKEACPFNLAPTTSTT ATLALGDALAICLFELKGLGSEDFRKNHPGGSLGERLKVKVKEIMLTDEKIPVVSEGTLLEDAIVEIDKKRLGCVLITNS LGILTGIITDGDLRRIFLKYKTYSNLKVEEVMTRNPKVIEENRLASEALEMMEKYLITVLPVINYDQKLVGILHLHDILG KGTFKFTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-43 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 9e-44 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-43 | 43 |
