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Name : TOPB45_1626 (TOPB45_1626) Accession : YP_004628632.1 Strain : Thermodesulfobacterium geofontis OPB45 Genome accession: NC_015682 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1626276 - 1627562 bp Length : 1287 bp Strand : + Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: toc:Toce_0176 seryl-tRNA synthetase DNA sequence : ATGCTTGATATAAAAATTATAAGAGAAAAGCCTGAATGGGTTAAAGAAAGACTTAGAACAAGAGGGGAAGATTATCCTAT AGATGAGATATTAGAGCTTGATAAGAAAAGAAGAGAACTTATACAGAGGGTAGAAAATTTAAGGCATATAAGAAGAGAAG AGTCTGAAAGAATTGGGAAACTTAAGAAAGAAGGAAAGGAAGAGGAAGCAAAGGCTCTTTCTGAAAAGGTAAAGGCTCTT TCTGAAGAGCTTAAAGGTTTAGAAGAGGAGCTTAAAAAGGTTGAAGAAGAGCTTGAATTTAAAATGAGCTTAATTCCTAA TATACCTCATGAGAGTGTTCCTTTTGGAGTTTCTGCAGAGGATAATGTGGTGGTAAAGAGATGGGGAGATATTCCTAAGT TTGATTTTGAGCCAAAACCTCATTGGGAAATTGGGGAAGCTCTTGGGATACTTGATTTTGAAAGAGCCGGAAAGATTACA GGAAGTAGATTTGTAGTTTATTGGAATGAAGGGGCTTTACTTGAAAGGGCTTTAATAAATTTTATGCTTGATCTTCATTT GAAAAAACACGGATATAAAGAGGTGCTTCCTCCTTTTATAGTTAATGACAGGGCTCTTTTTGGGACAGGACAGCTTCCAA AGTTTAAGGTAGATCTTTTTAAGATTGAAGAATGGGATTATTATCTTGTTCCTACTGCCGAAGTTCCGGTAACTAATCTT CATCAAAATGAGATTTTGCCTGAGGAGGTTTTGCCTCTTTATTACGTAGCTTATACTCCTTGTTTTAGGTCTGAAGCAGG TTCTTATGGAAAGGATGTTAGAGGAATTATAAGACAGCATCAGTTTAATAAGGTTGAGTTGGTAAAATTTACTACTCCTG AAACTTCTTATGAGGAATTAGAGAGCCTTCTTCTTGATGCAGAGGAGGTTTTGCAATTGCTTGAACTTCCTTATAGAGTG GTTGTTCTTTGCACAGGGGATCTTGGATTTGCAGCAGCTAAAACCTATGATATAGAAGTTTGGGCACCTGGACAAAATCG CTTTATTGAAATTTCTTCTTGTTCAAATTTTGAGGATTTTCAAGCAAGAAGGGCAAATATAAGATATAGACCAAAAGGAG GAGGAAAGCCAAGATTTGTACATACCCTTAATGGTTCTGGACTTGCTGTGGGAAGAACTGTTATGGCAATTTTAGAAAAT TATCAGCAAGAAGATGGCTCAGTTGTTATTCCCAAGGTTCTTCGCCCTTATATGGGAGGTCTTGAAGTTATTAAAAGGAA AAAATAA Protein sequence : MLDIKIIREKPEWVKERLRTRGEDYPIDEILELDKKRRELIQRVENLRHIRREESERIGKLKKEGKEEEAKALSEKVKAL SEELKGLEEELKKVEEELEFKMSLIPNIPHESVPFGVSAEDNVVVKRWGDIPKFDFEPKPHWEIGEALGILDFERAGKIT GSRFVVYWNEGALLERALINFMLDLHLKKHGYKEVLPPFIVNDRALFGTGQLPKFKVDLFKIEEWDYYLVPTAEVPVTNL HQNEILPEEVLPLYYVAYTPCFRSEAGSYGKDVRGIIRQHQFNKVELVKFTTPETSYEELESLLLDAEEVLQLLELPYRV VVLCTGDLGFAAAKTYDIEVWAPGQNRFIEISSCSNFEDFQARRANIRYRPKGGGKPRFVHTLNGSGLAVGRTVMAILEN YQQEDGSVVIPKVLRPYMGGLEVIKRKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-97 | 56 |
