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Name : TOPB45_1576 (TOPB45_1576) Accession : YP_004628582.1 Strain : Thermodesulfobacterium geofontis OPB45 Genome accession: NC_015682 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1581918 - 1583411 bp Length : 1494 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: dvl:Dvul_0888 lysyl-tRNA synthetase DNA sequence : ATGACAGAGGAACACCAAATTATAAAGGTAAGATATGAGAAGCTTTCTGCTATAGAAAAAATGGGAATAAAAAGTTATCC TAATGATTTTCGTCCTCAAGATAAAGCTAAATATTTAAAAGAAATTTATAAAGATATGCCTCCAGAGGAACTTGAAAAAA GAGAAGCTGAATTTTCCTTAGCTGGTAGGGTTATGAGTAAAAGAGAAATGGGGAAAATTATTTTTTCTCATATTCAAGAT GAGACAGACAAAATCCAGATTTTGATAGCTAAATCTGAGTTACCAGAGGAAGATTTTAATTTCTTCAAAAAATTTATAGA TATAGGAGATATTATAGGAGTTAAAGGCAAACTTATTAAAACCAAAACAGGTGAAATAACCATCTTGGTTAAATTTTTAA AACTTCTTACCAAAGCCTTAAGACCCCTTCCTGAAAAATATCATGGATTAAGAGATACAGAACTAAGATATAGAATGAGA TATTTAGACCTAATAATGAATCAAAGGGTAAGAGAAATTTTTAGGATGAGAACCCAAATTATCCAATATATAAGAGATTA TTTTATTTCTGAAGGTTTTTTAGAAGTAGAAACTCCTATGATGCATCCTATTGTAGGAGGTGCAACTGCAAAACCTTTTG TGACTTATCATAATGCCTTAGATATGAATCTTTATTTGAGAATTGCTCCTGAACTTTATTTAAAAAGACTCCTTGTAGGG GGATTTGAAAGGGTTTTTGAATTAAATAGAAATTTCAGAAATGAAGGGGTTTCAAGCAAACACAATCCAGAATTTACTAT GCTTGAATTTTATGAAGCCTACGCTACCTATGAAGATCTTATGAAAAGAACAGAAGAACTGTTTTACGGTCTTGCATTGG AAATAAAAGGAACTCCAGTAATAACCTATCAGGGTAATGAAATTGATCTTACTCCTCCTTGGAAAAGAATAGAATTTTTA AAAGCTTTAACTGAGTTAGGAGGAATACCTGAAGAAATTTTAAATGACAGAGAAAAACTTTTCAATTTTGCTAAAGAAAA GGGGATCGAGCTTAATTTAAAAGATCCCCGTATTGGTAAATGGTGGACTAAACTTTTTGAAGAACTTGTTGAACCTAAGC TCATTCAACCTACCTTTGTAATAAAATATCCTGTAGAAGTTTCTCCACTTGCAAGAAGAAATGACGAAGATCCAAGGTTT GCAGATAGATTTGAATTTTATATGGGTGGGAAGGAAATTGCTAATGCCTTTTCCGAATTAAATGATCCAAGAGATCAGAG AAAACGTTTTGAAGAACAACTTAAATTAAGAGAAATAGATGAAGAAATACCTCCGGAAATAGATGAAGATTTCTTAAGGG CTCTAGAATATGGTATGCCTCCTTGTGCAGGAGAAGGAATAGGAATTGATAGGGTAGTTATGATTTTTACAGATAGTCCA TCTATTAGAGAAATTATCTTGTTTCCTCATTTAAGAAAAAAAGAAGATTTATAA Protein sequence : MTEEHQIIKVRYEKLSAIEKMGIKSYPNDFRPQDKAKYLKEIYKDMPPEELEKREAEFSLAGRVMSKREMGKIIFSHIQD ETDKIQILIAKSELPEEDFNFFKKFIDIGDIIGVKGKLIKTKTGEITILVKFLKLLTKALRPLPEKYHGLRDTELRYRMR YLDLIMNQRVREIFRMRTQIIQYIRDYFISEGFLEVETPMMHPIVGGATAKPFVTYHNALDMNLYLRIAPELYLKRLLVG GFERVFELNRNFRNEGVSSKHNPEFTMLEFYEAYATYEDLMKRTEELFYGLALEIKGTPVITYQGNEIDLTPPWKRIEFL KALTELGGIPEEILNDREKLFNFAKEKGIELNLKDPRIGKWWTKLFEELVEPKLIQPTFVIKYPVEVSPLARRNDEDPRF ADRFEFYMGGKEIANAFSELNDPRDQRKRFEEQLKLREIDEEIPPEIDEDFLRALEYGMPPCAGEGIGIDRVVMIFTDSP SIREIILFPHLRKKEDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-100 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TOPB45_1576 | YP_004628582.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-100 | 48 |
