Gene Information

Name : TOPB45_1457 (TOPB45_1457)
Accession : YP_004628464.1
Strain : Thermodesulfobacterium geofontis OPB45
Genome accession: NC_015682
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 1455741 - 1456658 bp
Length : 918 bp
Strand : -
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: pmx:PERMA_0444 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase

DNA sequence : 
ATGGTTATTAAAGTAGGAACAAGAGGAAGCAAATTAGCTTTAGCTCAAACTGATTGGGTAATTTCACAATTAAAATCCTT
TTTTCCTAAAATTAATTTTGAAAAAATAATTATAAAAACAACTGGAGATAAAATTTTAGACTCTCCTTTAAGTAAAATAG
GGGGAAAAGGACTTTTTGTAAAAGAAATAGAAGAAGCCCTTTTAAGAGGAGAAATAGATTTTGCTATCCATAGTATGAAA
GATGTCCCCTCTCTAATACCTGAAGGTTTGGAAATAGCCTGTATTCCTCAAAGGGAATCTCCTTTCGATGTTTGGATTTC
AAATTATAAAGATATTTTAGAATTACCATCTTATTCTAAAATCGGAACCAGTAGTTTGAGAAGACTTTCCCAGTTAAAAA
AACTTAGGAAAGATTTAGAAATTTTACCTCTTAGAGGAAATGTAGATACCCGTTTAAGAAAATGGAAAGAAGGGCAATTT
GATGGAATTATTTTAGCTGAAGCTGGATTAAAAAGATTAGGAATAGAAATTAGCTATAAAAGATTAACTATAGAGGAGAT
GGTCCCAGCTGTTGGTCAAGGAGCTCTTGGAATAGAAATAAGAAAAGATGATAAAAAACTCAAAGAAATGCTAAGTAAAA
TTCATTCAGAAACTACAGCAATTTGTATAAAGGTAGAAAGAACATTTTTAAAGACCTTAGAAGGTGGTTGTCAAGTACCT
ATAGGAGCTTATTGCTGGATTGAAAATTCTAAACTTTTTGTAATTGGATTTATAAGTGATTTAGAGGGAGAAAGATTTTA
TAAACTAAGGGATGAGGGGAGTATTTCTGAAGCAGAAAAACTCGGAGAAAGACTTGCTAAAAAACTTCTAAAAGCTGGCG
GAGAAGAAATTTTAAAAGAGATTTATAAGAGAGAATAA

Protein sequence : 
MVIKVGTRGSKLALAQTDWVISQLKSFFPKINFEKIIIKTTGDKILDSPLSKIGGKGLFVKEIEEALLRGEIDFAIHSMK
DVPSLIPEGLEIACIPQRESPFDVWISNYKDILELPSYSKIGTSSLRRLSQLKKLRKDLEILPLRGNVDTRLRKWKEGQF
DGIILAEAGLKRLGIEISYKRLTIEEMVPAVGQGALGIEIRKDDKKLKEMLSKIHSETTAICIKVERTFLKTLEGGCQVP
IGAYCWIENSKLFVIGFISDLEGERFYKLRDEGSISEAEKLGERLAKKLLKAGGEEILKEIYKRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-55 47
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-55 47