Gene Information

Name : Thein_0604 (Thein_0604)
Accession : YP_004625449.1
Strain : Thermodesulfatator indicus DSM 15286
Genome accession: NC_015681
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 642444 - 643160 bp
Length : 717 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR015854:IPR017871:IPR003593; KEGG: ppd:Ppro_3016 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related;

DNA sequence : 
ATGACTAAGCTGGCTATTGAGGCCAAAAATCTTACCAAAGTTTACGGCTCAGGTCTGGGGAGAGTAGAGGTTTTAAAAGG
TGCAGACCTTGAAATACTTGCTGGTGAAAAAGTGGCTATTGTAGGGGCTTCAGGGGTGGGAAAAACGACTTTGCTTCACA
TCATAGGAACTCTTGACCGTCCGGACAGTGGCCAGGTGCTTCACTTCGGTGTTGATGTTTTTTCTCTCCCTGATCTAGAG
CTTTCTCGTTTTAGAAATAAAAAACTGGGTTTTGTTTTCCAATTCCATCATTTATTGCCAGAGTTTAATGCTCTCGAGAA
CACTATGCTCCCTGCTTTGATTGAAGGAAGGCCTACTAAAGAAGCACGAGAGCTTGCCGAAGCCATTCTTGAAAAGGTTG
GTCTTTCGCATAGACTAACTCATCGTGTATCTGAACTTTCTGGCGGGGAAAGGCAGAGAGTAGCTATTGCCCGAGCCTTG
GTTTTAAACCCTCCGGTACTTTTAGCTGATGAACCTACTGGTAATCTGGATGTAAAGACGGCTCAGGGAATAGTTGATCT
TTTTTTGTACATTAACCAAGCCCATGCTACCACCTTAGTGGTAGTTACCCATAATCCAGAGCTAGCAGCCAAAATGGACC
GGGTTTTTGGTTTGAGTAACAGAAAAATTATTGAACTACCAAAGGATGAACCATGGCCTTGGACTTTAAAAAAGTAA

Protein sequence : 
MTKLAIEAKNLTKVYGSGLGRVEVLKGADLEILAGEKVAIVGASGVGKTTLLHIIGTLDRPDSGQVLHFGVDVFSLPDLE
LSRFRNKKLGFVFQFHHLLPEFNALENTMLPALIEGRPTKEARELAEAILEKVGLSHRLTHRVSELSGGERQRVAIARAL
VLNPPVLLADEPTGNLDVKTAQGIVDLFLYINQAHATTLVVVTHNPELAAKMDRVFGLSNRKIIELPKDEPWPWTLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thein_0604 YP_004625449.1 ABC transporter NC_012469.1.7686878. Protein 3e-36 49
Thein_0604 YP_004625449.1 ABC transporter NC_008702.1.4606598. Protein 3e-32 46
Thein_0604 YP_004625449.1 ABC transporter CP001581.1.gene798.p Protein 2e-34 41