Gene Information

Name : Thein_2196 (Thein_2196)
Accession : YP_004627008.1
Strain : Thermodesulfatator indicus DSM 15286
Genome accession: NC_015681
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 2282066 - 2283478 bp
Length : 1413 bp
Strand : -
Note : COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR004809; KEGG: dal:Dalk_5100 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: Glutamine synthetase; TIGRFAM: glutamine synt

DNA sequence :
ATGACACCCAAAGAAGTTCTTGAATTTGCCAAAAAAAATGGCGCTAAAATGGTTGACCTGAGGTTTACTGACTTTCCAGG
TATGTGGCAGCACTTTTCCGTGCCCATTGAAGAGTTGACAGAAGAAAGCTTTGAAGCTGGTTATGGTTTTGACGGGTCTT
CTATTCGTGGTTGGCAGGAAATCCACGAAAGTGACATGATAATTATTCCCGACCCCAACACCGCGGTAATGGATCCTTTC
TTTGAAGTTCCTACTTTAGTATTGCTTTGTAATGTTTATGATCCTATTACCAAAGAACCTTACAGCCGTGACCCGCGTTA
TGTGGCCCAGAAGGCAGAAGAGTACCTCAAGAGCACTGGTTTAGGTGATGTTGCCTATTTTGGCCCTGAAGCGGAATTCT
TTATCTTTGATGACATTCGTTATGACACCGGTTCTAACTACTCCTTCTATTTTGTAGATTCTATAGAAGGTACTTGGAAT
ACAGGTAGAGAAGAATGTCCTAACCTTGGTTATAAACCTCGTCACAAAGAAGGTTATTTCCCAGTGCCTCCGTCTGATAA
GTTTCAGGATCTCCGTACCGAAATGGTTATGGTGCTTCAGCAGATTGGAATCAAGGTAGAATGTCAGCACCACGAAGTAG
CTACTGCTGGTCAAGCCGAGATTGACATGCGCTTTGCCCCGCTTCTCAAAATGGGTGACCAGCTAATGTGGTTCAAGTAT
GTTCTCAAAAACGTAGCTTACAAACACGGTAAAACCGTTACCTTTATGCCCAAACCTCTTTTTGAGGACAATGGTTCTGG
TATGCATACCCACATGAGTATTTGGAAGGGTGATACCCCGCTTTTTGCTGGTGATCGTTATGCCGGTCTTTCTGAAACTG
CCCTTTACGCCATTGGTGGTATCCTTAAACACTGTAAGGCAGTGTGCGCCTTTACCAACCCCACCACTAACTCTTATAAA
CGTTTGACTCCTGGTTTCGAAGCACCGGTTAACCTCTGTTACTCCAGCCGAAACCGTTCAGCGGCTATTCGTATTCCCAT
GTATAGCCCAAGCCCCAAGGCCAAGCGTATTGAATTCCGTACCCCTGATCCGTCTTGTAACGGCTATCTTGCCTTTGCTG
CTATGCTTATGGCTGCTCTTGATGGTATTGAAAACCGCATTGATCCTGGTGAACCCATGGATAAGGACCTTTACAGCCTC
CCACCAGAGGAGTTGAAGGATATCCCAACCACCCCTGCTACTCTAGAAGAGGCTCTTCAGGCCCTTGAAGAAGACCATGA
GTTCTTGATGAAAGGCGATGTCTTTACTGAAGACCTTATTAGCAAATGGATTGAGTATAAGCGCGAAAATGAAGCTGACC
AGGTACGTCTACGTCCGCATCCTTACGAGTTCTTCCTCTATTTTGATATCTAA

Protein sequence :
MTPKEVLEFAKKNGAKMVDLRFTDFPGMWQHFSVPIEELTEESFEAGYGFDGSSIRGWQEIHESDMIIIPDPNTAVMDPF
FEVPTLVLLCNVYDPITKEPYSRDPRYVAQKAEEYLKSTGLGDVAYFGPEAEFFIFDDIRYDTGSNYSFYFVDSIEGTWN
TGREECPNLGYKPRHKEGYFPVPPSDKFQDLRTEMVMVLQQIGIKVECQHHEVATAGQAEIDMRFAPLLKMGDQLMWFKY
VLKNVAYKHGKTVTFMPKPLFEDNGSGMHTHMSIWKGDTPLFAGDRYAGLSETALYAIGGILKHCKAVCAFTNPTTNSYK
RLTPGFEAPVNLCYSSRNRSAAIRIPMYSPSPKAKRIEFRTPDPSCNGYLAFAAMLMAALDGIENRIDPGEPMDKDLYSL
PPEELKDIPTTPATLEEALQALEEDHEFLMKGDVFTEDLISKWIEYKRENEADQVRLRPHPYEFFLYFDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-92 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thein_2196 YP_004627008.1 glutamine synthetase, type I VFG1399 Protein 4e-117 57