Gene Information

Name : Thein_2125 (Thein_2125)
Accession : YP_004626937.1
Strain : Thermodesulfatator indicus DSM 15286
Genome accession: NC_015681
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2202126 - 2202548 bp
Length : 423 bp
Strand : -
Note : COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR000983:IPR012902:IPR013545:IPR010054; KEGG: tbd:Tbd_1293 tyep II secretion system protein G; PFAM: type II secretion system protein G; SPTR: Tyep II secretion system protein G; TIGRFAM:

DNA sequence : 
ATGAAGAGAAAAAGGGCTTTTACTTTGCTTGAATTACTGGTGGTTTTAGTTATTTTAGGGCTCCTTGCCGCCCTGGTGGG
GCCAAGGCTTATCGGTAAAGTGGGTAAAGCCAAGTCACAGATAGCCCGAAGTCAAATTGCTCTTTTGGAATCAGCCCTTG
ACCAATATCGTCTTGACATGGGACATTACCCGACTACAGAAGAAGGCCTTAAAGCTTTGGTAGAACCCCCTGCTAACGAA
GAAGACAAGGCCAAATGGCAAGGGCCATATCTCAAAAAACGAAAAGTCCCGCTTGACCCCTGGGGACGTCCTTATCACTA
TCGCTCGCCAGGAGAACATGGAGACTACGATTTATGGACCTACGGCGCTGACGGAAAACCAGGCGGTGAAGGAGAAGATG
CTGACATTACCAGCTGGGAATAG

Protein sequence : 
MKRKRAFTLLELLVVLVILGLLAALVGPRLIGKVGKAKSQIARSQIALLESALDQYRLDMGHYPTTEEGLKALVEPPANE
EDKAKWQGPYLKKRKVPLDPWGRPYHYRSPGEHGDYDLWTYGADGKPGGEGEDADITSWE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-20 54
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-21 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thein_2125 YP_004626937.1 general secretion pathway protein G VFG2050 Protein 2e-21 54
Thein_2125 YP_004626937.1 general secretion pathway protein G VFG1871 Protein 5e-23 47
Thein_2125 YP_004626937.1 general secretion pathway protein G VFG0180 Protein 3e-21 47