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Name : Thein_2124 (Thein_2124) Accession : YP_004626936.1 Strain : Thermodesulfatator indicus DSM 15286 Genome accession: NC_015681 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2200636 - 2202123 bp Length : 1488 bp Strand : - Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR007831:IPR003593; KEGG: dat:HRM2_30260 GspE3; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; DNA sequence : ATGGAGCCTTTTGATAAAGCTATTCTTGAAACCAGAGCCGATGAAATAAGCCCCCTTGAAGGAATTGAGGCCGCTTTCTT AAAGGCTGTAAAGGGTTTTCCTTTCTTTTTAGGAGAGGAGGTTTATTTACTGATTCCTTCCCCTGCCAATATCTTTTTGG CAGACCTTATTGAACGCCAGTACAACCAGCCTCCGCATGTCTTTCTCGCTGAAGAAGACTATATTCTGGAGTTAATCCAG AAGTTCTACGAGGCCCCGCCAGAAACTGCCGAAGAAGTAGAGGAAGAAGAACCGGAAGATCTTGAACTCTTGAAAGACCT AGCTTCTGAGGCCCCGGTGGTAAGACTAGTTAACCGGGTTATACGTGAAGCGGTAGAAATGCGGGCCACAGACATTCACT TTGAGACTGAACGCAAGGCCCTAAGAATTCGTTATCGTATTGACGGGCTTCTTCACGAGATAGCCACTCATCCCAAAAAA CTGGCTGCTCCGGTCATCTCCCGCCTAAAACTTATGGCCGGCCTTAACATTGCGGAACACAGGTTACCTCAAGATGGCCG CATTCGTTTTAGAGTGGGAGGAGAAGACTTAGATATCAGGGTTTCCACCATGCCTGCGGTTACCGGAGAAAGCGTGGTAT TGCGTCTTCTCTCAAGGCAAAAAGGCTTCCTTTCTCTTGAAAAACTTGGTCTTGAGGCAGACCATTATAAGATGCTTCTT GAGCTAATTTCTCAGCCAAACGGCATAATTTTAGTTACTGGCCCCACCGGTTCAGGTAAAACTACTACTCTTTACGCGGC CCTTTCTATATTGAATAAAGCTGATCGCAAAATCATCACCATTGAAGACCCGGTAGAGTATCAGCTGGCTGGCGTAACCC AGATCCAGATAAAGCCCCAGATTGGCCTAACTTTTGCCAAAGCTTTGAGGTCTATTTTACGGCACGACCCTGATATTATC CTGGTAGGCGAAATCCGTGACCTAGAGACCGCTGAAATTGCCATTCAGGCTGCCCTTACCGGCCACCTTGTATTTTCAAC CCTCCATACCCGAGATGCCTTAGGAGCGGCGGTGCGCTTGGCAGATATGGGGGTTGAGCCTTATCTAATCGCTGCTTCTG CGGTGGGTTTAATGGCCCAGCGCTTAGTAAGAGTCCTTTGTGACAAGTGCGCTGAAGAAGTTTCACCTCCTCAAGAGTTT TTGACTTTACTTAAAAGACTTCCCACTCCACCTGAAAAAATTCGTTATCGCAAGGCCGTGGGCTGCCCTCACTGTGCTGG CACTGGCTTTTTAGGAAGGACAGCCATTTACGAAATCTACCCGGTAGATGAGGCCTTACGCCGTCTGATATTAAACCGCA GCTCAGAAGAAGAATTAAAAAACTGGGCGAAGGAACGAAGTTATCTTTCTCTTTTAGAAAATGGCTTAAGAAAAGTGGCC AAGGGAGTTACTTCTCTGGAAGAAGTCTTGAGGGTAGCAGGAACGTAG Protein sequence : MEPFDKAILETRADEISPLEGIEAAFLKAVKGFPFFLGEEVYLLIPSPANIFLADLIERQYNQPPHVFLAEEDYILELIQ KFYEAPPETAEEVEEEEPEDLELLKDLASEAPVVRLVNRVIREAVEMRATDIHFETERKALRIRYRIDGLLHEIATHPKK LAAPVISRLKLMAGLNIAEHRLPQDGRIRFRVGGEDLDIRVSTMPAVTGESVVLRLLSRQKGFLSLEKLGLEADHYKMLL ELISQPNGIILVTGPTGSGKTTTLYAALSILNKADRKIITIEDPVEYQLAGVTQIQIKPQIGLTFAKALRSILRHDPDII LVGEIRDLETAEIAIQAALTGHLVFSTLHTRDALGAAVRLADMGVEPYLIAASAVGLMAQRLVRVLCDKCAEEVSPPQEF LTLLKRLPTPPEKIRYRKAVGCPHCAGTGFLGRTAIYEIYPVDEALRRLILNRSSEEELKNWAKERSYLSLLENGLRKVA KGVTSLEEVLRVAGT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-90 | 52 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-90 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thein_2124 | YP_004626936.1 | type II secretion system protein E | VFG0182 | Protein | 8e-94 | 52 |
| Thein_2124 | YP_004626936.1 | type II secretion system protein E | VFG1876 | Protein | 4e-88 | 51 |
| Thein_2124 | YP_004626936.1 | type II secretion system protein E | VFG2048 | Protein | 4e-90 | 51 |
| Thein_2124 | YP_004626936.1 | type II secretion system protein E | VFG0233 | Protein | 8e-80 | 46 |
| Thein_2124 | YP_004626936.1 | type II secretion system protein E | VFG2426 | Protein | 2e-70 | 45 |
