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Name : Thein_1887 (Thein_1887) Accession : YP_004626706.1 Strain : Thermodesulfatator indicus DSM 15286 Genome accession: NC_015681 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1958933 - 1960564 bp Length : 1632 bp Strand : - Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR007831:IPR003593; KEGG: pmx:PERMA_0977 type IV pilus assembly protein TapB; PFAM: type II secretion system protein E; General secretory syste DNA sequence : ATGAAACCCATAGGCCAGTTACTTAAAGAAGCAGGTTGTATCACCGAAGAGCACATCAGGTTTGCGCTGGTGGAGCAGCA GGCCACCGGCGAACGCCTGGGCGAAATTCTGGTGCGTCTGGGGCTGGTTACGGACGCAGAGATTGCCCAGGTTCTCGCCC AGCAAAGTAACCTGCCCTTCATTGACCTTGCCAACATTAATCCTGAAAAAAGGGCCCTCTTACAAATTCCCTCACGGTTT GCCAGAGAGGCACAGGTATTGCCTTTCAAACTTGAAAATGGTGTTTTGCATGTGGCAATTGCTGATCCGTTTGACCGACG GGTAAGAGAAGCCCTTCTGCGCCATACCCAAACAAAAATAGAACTTTATGTAGCACCGAAGTCTCAAATACAAAAGACCG TCGAACACTTTTACTACCTGCTTCAACACCCACCAAGAGAAGAAATTAACAACCTCCTTGATAGACTTAAAAGAAATCCA ACCCTTAATTTTGATGTGGATCAGCTTTTTCAAAACCTGATGATAGAAGCCATTAACGTAAACGCTGCTGATATACACTT TGTGCCCTATGAAAAAACATTTAGGGTTTACTACCGGGTAGATGGGCTCCTTGAGCTGGCTTTCGTGTTTCCCGCTCCGA TTCACGGGCGCTTAATAAACGCAGTAAAAATTAGAGCCGGCATGGACATTGCCGAACAGCGCCTGCCGCAGGATGGCAAG ATGCGCTTTGAGTTTCTGGGAGAAGAATTTGACCTGCGAATTTCCACTGTGCGCGGGTTATTTGGCGAAAACATGGTCAT AAGGCTTCTCCCTATTAAGGCCTCCATCAGGCACCTAATCTCCCTTGGCTTTGACCAGGAAGAAGTAAAGGCCCTTGAAG AACTCTTCACCAAGCCAAATGGCATGGTGCTGGTAACTGGGCCTACAGGCTCTGGGAAAACTACCACCCTTTATGCCGCT CTGCGACTTGTTGACGCTATCAAGAAAAATGTACTTACTGCTGAAGACCCTGTAGAATACTATTTTCCCCTAATTCGGCA AACCCAGATAAACGAAGACATAGGCTACACTTTTGCCCAAGCCATTAGACACTTTTTACGACAGGACCCAGATGTAATTC TTGTAGGCGAAATAAGGGACGAGGAAACAGCCCAGATGGCAGTGCGCGCCGCTTTGACAGGACATCTCCTGCTTTCTACC CTGCACACAAACGACGCCGTTTCGGCCATTGAGCGTCTGCGCGACTTAGGCATTACGAACTTCCTGTTGGCGGGAAGTCT CCTTGGCGTTACTGCCCAGCGGCTTCTGCGGCGTCTTTGCCCCCACTGCCTTGAAGAATACAGGCCTTCTCCAGAACTAC TTGAAAAATATGGGCTTCCCCATGACGCTACTTACTTCCGTGGAAAAGGCTGTGAAATCTGCCGTGGCAAAGGTTTTTTA GGCAGGACGGCGGTTACCGAAATTCTTTTATTTGATGAAGAGATTAAAGAGTTGATAGCCAAAGGTGTCTCCACGGTGGA AATAAAAAAAGTAGCCGTGGCCCAGGGCATGAAGACTCTCTGGGATTCGGCTAAAAAACGCATACTAGCAGGAGAAACTA CAGTAGAAGAAGCGGTGAGGGTGCTTGGCTAA Protein sequence : MKPIGQLLKEAGCITEEHIRFALVEQQATGERLGEILVRLGLVTDAEIAQVLAQQSNLPFIDLANINPEKRALLQIPSRF AREAQVLPFKLENGVLHVAIADPFDRRVREALLRHTQTKIELYVAPKSQIQKTVEHFYYLLQHPPREEINNLLDRLKRNP TLNFDVDQLFQNLMIEAINVNAADIHFVPYEKTFRVYYRVDGLLELAFVFPAPIHGRLINAVKIRAGMDIAEQRLPQDGK MRFEFLGEEFDLRISTVRGLFGENMVIRLLPIKASIRHLISLGFDQEEVKALEELFTKPNGMVLVTGPTGSGKTTTLYAA LRLVDAIKKNVLTAEDPVEYYFPLIRQTQINEDIGYTFAQAIRHFLRQDPDVILVGEIRDEETAQMAVRAALTGHLLLST LHTNDAVSAIERLRDLGITNFLLAGSLLGVTAQRLLRRLCPHCLEEYRPSPELLEKYGLPHDATYFRGKGCEICRGKGFL GRTAVTEILLFDEEIKELIAKGVSTVEIKKVAVAQGMKTLWDSAKKRILAGETTVEEAVRVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-65 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-66 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thein_1887 | YP_004626706.1 | type II secretion system protein E | VFG0182 | Protein | 4e-68 | 45 |
| Thein_1887 | YP_004626706.1 | type II secretion system protein E | VFG2426 | Protein | 2e-58 | 42 |
| Thein_1887 | YP_004626706.1 | type II secretion system protein E | VFG2048 | Protein | 3e-66 | 42 |
| Thein_1887 | YP_004626706.1 | type II secretion system protein E | VFG1876 | Protein | 2e-62 | 41 |
