Gene Information

Name : Thein_1692 (Thein_1692)
Accession : YP_004626514.1
Strain : Thermodesulfatator indicus DSM 15286
Genome accession: NC_015681
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1754841 - 1755557 bp
Length : 717 bp
Strand : -
Note : COGs: COG0689 RNase PH; InterPro IPR002381:IPR018336:IPR001247:IPR015847; KEGG: gsu:GSU1795 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclea

DNA sequence :
ATGCGCAAGGACGGACGAAGACCTGACGAAATAAGGCCGGTAAAAATAACACCTCATTACTTAAAGTACGCCGAAGGCTC
GGTGCTCATGGAGCTTGGTGAAACCAAAGTTATTTGCAGCGTCTCGGTGGAAGAAAAAGTGCCTCCGTTTTTAAAAGACA
CCGGTATGGGCTGGATAACGGCAGAATACGCCATGCTTCCTCGCTCAACGCACCAGCGCACTCCGCGCGAAAGTGCTACA
GGCAAAAAAGGTCGCTCCTACGAAATTCAGCGCCTCATCGGCCGCTCCCTCCGGGCCGTGGTTGACCTCACCCTTCTTGG
CGAAAGGACTTTCTGGGTTGATTGCGACGTCATGCAGGCCGATGGCGGCACGCGGACCGCTTCCATTACCGGAGCCTGGG
TGGCCCTGGCACTTGCCTTCAAAAAGCTCTTAAAAGAAGAAGTTTTGACCCAGGACCCGATGAAACATCAGCTGGCAGCC
ATAAGCTGTGGGCAAGTGACCGGTGAAGTACTTCTTGACTTAAACTACGAAGAAGACTCGCTGGCCGAAATAGACGCTAA
CTTCGTTATGACGGCTGAAGGCCACATCGTAGAAATCCAGACCACCGCGGAAAAAGAACCCTTCTCCTGGGAAACCTTTG
AAAAAATGAAAGACCTGGCCTTAAAGGGCATAAATGAACTTGCCCAAATCCAACAAAAGGTGCTTGAAAATGCCTAA

Protein sequence :
MRKDGRRPDEIRPVKITPHYLKYAEGSVLMELGETKVICSVSVEEKVPPFLKDTGMGWITAEYAMLPRSTHQRTPRESAT
GKKGRSYEIQRLIGRSLRAVVDLTLLGERTFWVDCDVMQADGGTRTASITGAWVALALAFKKLLKEEVLTQDPMKHQLAA
ISCGQVTGEVLLDLNYEEDSLAEIDANFVMTAEGHIVEIQTTAEKEPFSWETFEKMKDLALKGINELAQIQQKVLENA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-50 53