Gene Information

Name : Thein_1686 (Thein_1686)
Accession : YP_004626508.1
Strain : Thermodesulfatator indicus DSM 15286
Genome accession: NC_015681
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1748660 - 1749073 bp
Length : 414 bp
Strand : +
Note : COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: pca:Pcar_0643 ssDNA-binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-stranded DNA-binding protein; TIGRFAM: single-st

DNA sequence : 
ATGAGTGTGAATAAAGTTATTCTCATAGGGCGCCTTGGAGCCGACCCTGAAATTCGTTACACCGCTGATGGCCAGCCGGT
GGCCACTTTTAGGCTGGCTACCTCTGAGCGATGGACGGACAAGAACGGCCAGCGCCAGGAAAGAACAGAGTGGCACCGTG
TAGTGGCTTTTGGCAAATTAGCTGAAATTTGCGGGGAATATTTGTCTAAAGGCCGCCAGGTTTATATAGAAGGGCGCCTT
CAGACCCGTTCTTACGAAGACCGCGACGGCATAAAACGTTACGTGACAGAAATCGTCGCTCAGAATATGCAAATGCTTGG
CCGCCGTGACGAAGTCTCAGCTGGCCCAGCTCCCAGTGCTGGGACTAGCGATTTTGTTGATGAGCCACCCCCAGACGAAG
ACTTGCCTTTTTAG

Protein sequence : 
MSVNKVILIGRLGADPEIRYTADGQPVATFRLATSERWTDKNGQRQERTEWHRVVAFGKLAEICGEYLSKGRQVYIEGRL
QTRSYEDRDGIKRYVTEIVAQNMQMLGRRDEVSAGPAPSAGTSDFVDEPPPDEDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 2e-29 50
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 2e-29 50
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 1e-29 50
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 4e-27 46
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 4e-19 44
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 7e-19 44
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-16 42