Gene Information

Name : Thein_1638 (Thein_1638)
Accession : YP_004626462.1
Strain : Thermodesulfatator indicus DSM 15286
Genome accession: NC_015681
Putative virulence/resistance : Unknown
Product : alanine racemase domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 1701484 - 1702176 bp
Length : 693 bp
Strand : +
Note : COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: pmx:PERMA_0107 pyridoxal phosphate enzyme, YggS family; PFAM: alanine racemase domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2505284960; PFAM: Al

DNA sequence :
ATGAGCATCAAAGAACGTTTGGAGATTATTCTTGAAAAAATTGCCAAGGCCGCAGACAAAGCGGGCCGAAAACCTGAAGA
GGTAAAACTCCTTGGGGCTTCAAAAACTCAGCCTCCTGAAAAAATTCGCGAAGCCTTTGCGGCAGGCCTTTCCCTATTTG
GCGAAAATTATGTGCAGGAGGCCAAGAAGAAAAAAGAGGCTTTGACTGATCTCCCTTTAACATGGCATCTAATAGGCTAT
CTTCAGCGTAACAAGGCCAAAGACGCTTTAAAGATATTTGACCTTATTGAGACTGTTGACCGAGAGGCTATTGCCACTGA
ACTTGAAAAACGCGCGGCCAGGCTTGAAAAAGTTGTCCCGGTTTTCATTGAAGTTAACGTAGGCGGTGAGGAAACAAAAG
CAGGTGTTGCGCCTGAAGAGCTTCCAGCTCTGGTTGAATGTGTGCTAGGTCTTTCTCATCTTCGTCTAGAAGGCTTGATG
ACTATTCCTCCTTATCGAGAAGATCCTGAAGAAGTTAGGCCTTTTTTTGTCCGTTTGAGAGAACTCAAAGAAGACCTTGA
GCGGCGTTTTCCTGAAGCCAAATTTCGCGAACTTTCTATGGGTATGAGCCACGATTTTCATGTGGCCGTAGAAGAAGGGG
CTACTATTGTGCGGGTGGGGACAGCCCTTTTTGGCCCTCGCCCTAAAAAGTAA

Protein sequence :
MSIKERLEIILEKIAKAADKAGRKPEEVKLLGASKTQPPEKIREAFAAGLSLFGENYVQEAKKKKEALTDLPLTWHLIGY
LQRNKAKDALKIFDLIETVDREAIATELEKRAARLEKVVPVFIEVNVGGEETKAGVAPEELPALVECVLGLSHLRLEGLM
TIPPYREDPEEVRPFFVRLRELKEDLERRFPEAKFRELSMGMSHDFHVAVEEGATIVRVGTALFGPRPKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 2e-28 42
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-28 42
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-28 42
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-28 42