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Name : Thein_1571 (Thein_1571) Accession : YP_004626395.1 Strain : Thermodesulfatator indicus DSM 15286 Genome accession: NC_015681 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease, HsdR family Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1629591 - 1632719 bp Length : 3129 bp Strand : - Note : COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterProIPR004473:IPR014001:IPR014021:IPR007409:IPR 006935; KEGG: chl:Chy400_1964 type I site-specific deoxyribonuclease, HsdR family; PFAM: p DNA sequence : ATGGCTGAATCCGAAGTTGAATCGGCGGCGCTGGCCTGGCTCGAATCCCTAGGCTGGCAAATAAAGCACGGGCCGGAGAT CGCTCCCGGGGAGCCTTTCGCCGAGCGGGACGATTATCAGGAGGTAATTCTCCCACAACGCCTGAAGGATGCTCTGGCCC GGCTAAACCCGGAACTTCCTATCGAGGCCCTAGATGAGGCTTTCCGAAAGCTCGTAAATCCTCCCGGCGCCACCGTAGAG GCTCGTAACCGGGCCTTCCACCGAATGCTCGTGGACGGAGTGACGGTAGAATATCGCCGGGAGGATGGCTCCATAGCCGG TGCCCAGGCGCGCGTAATAGACTTTGACGATTCCGAAAATAACGACTTTCTGGCCGTCAACCAGTTTACCGTTACCGAAG GTCGCCATACCCGCCGGCCGGACATCGTGCTTTTTGTAAATGGGCTTCCGCTAGTCATCATCGAATTGAAAAATCCGGCG GACGAAGAAGCCACCATCTGGACCGCTTATCAGCAACTTCAGACTTACAAAGCGGAACTTCCCACTCTCTTTGCCTTCAA TGAACTTTTAGTCATTTCGGACGGGCTGGAAGCCAGGATGGGTACCTTGACCGCCGGGCGGGAATGGTTCAAACCCTGGC GCACGATCTCAGGCGAGCGAGTGGAGGACGAAGGCGTCCTCCAGCTTGAAGTCCTTCTTAAGGGTGTTTTCGACCTGGAG CGGTTTTTGGAACTGATCCGAGATTTTATGGTGTACGAAGACGACGGCGGAAGGCTTTCCAAAAAAGTGGCTGGATACCA CCAATTCCATGCCGTGCGAGTAGCGGTGCGGGAGACCCTGAGGGCAGCTGCGCTCGCCAAAGACGAAGGCTTGCGCGTGA GAGAAGAAATAGGCCGTTATGAAGTGCGGGGCCAAGGTGGGCGGCCTGGCGACCGGCGTATCGGGGTAGTATGGCATACG CAGGGCTCCGGCAAAAGCTTGACCATGGTCTTCTATGCTGGACGCATCATTCGTGAGCCGGCCATGCAAAATCCTACGGT GGTGGTGCTCACCGACCGAAACGATCTGGATGATCAACTGTTTGGAGTTTTTTCCCGCTGTCAGGAACTTCTACGCCAGG AGCCTGTTCAGGCCAAAAGCCGGGCTCATCTTCGGGAGCTTCTTTCACGAGAAGCCGGAGGTATCATCTTTACCACCATT CAAAAGTTCTTTCCTGACGAAAAGGGCGACCAGCATCCGCTACTTTCTTCACGGCGCAACATTGTGGTAATTGCCGATGA AGCTCATCGAAGCCAGTACGATTTCATTGACGGTTTTGCCCGCCATATTCGGGATGCCTTACCCAATGCCTCTTTTATTG CTTTCACGGGAACACCGATTGAGCTTGAGGATCGCAACACGCGAGCCGTCTTTGGCGACTACATCTCCATTTACGATATC CAGCGAGCCGTAGAAGACGGTGCGACGGTGCCCATCTACTACGAAAGCCGGCTGGCAAAGCTTGCGCTACCCAAAGAGCT AAAGCCCAAAATCGACGAAGAATTCGAGGAAGTCACCGAAAGAGAAGAGGTCGAGCGTAAGGAGAAGCTCAAAACCAAAT GGGCACAACTTGAAGCCATTGTGGGGGCGGAACCACGCCTCCGCATGATCGCTAAAGATATAGTGAAGCATTTTGAGCGT CGTCTGGAAGCCCTCGATGGAAAGGGCATGATCGTTTGCATGAGCCGCCGGATATGCGTCGATCTTTATAACCAGATCAT TCACCTGCGTCCTGATTGGCACCACGAAGATGACGATAAAGGCGTAATCAAAGTGGTGATGACCGGTTCGGCGTCGGATC CTCCAGAATGGCAGCCCCACATCCGTAACAAAGAAAGACGGGAGTTCCTGGCCCGGCGTTTTCGTGATCCAAATGATCCC TTGAAGCTGGTAATCGTGCGCGACATGTGGCTTACGGGCTTCGATTGTCCGAGCCTTCATACCATGTACATCGACAAACC CATGCGCGGCCACGGGCTCATGCAGGCCATCGCCCGGGTGAACCGCGTCTTCCGCGATAAACCCGGAGGGCTGGTGGTGG ACTATATTGGTCTGGCCCGCGAATTAAAACAGGCGCTTGCGGTTTATACCGAAAGCGGAGGTAAGGGCCGCACGGCCCTT GATCAGGAAGAAGCGGTGGCGGTCATGCAGGAAAAATACGAAATTTGTTGTGATCTCTTTCACGGCTTCGACTGGTCGGC CTGGAAAACCGGAACACCTGAAGAACGTCTGGCCCTCCTTCCCGCTGCACAGGAACATATTTTGGCCCAGCCGGATGGGA AAGACCGTTTCGTCAAGGCGGTGCTCGAACTTTCCAAGGCCTTTGCCCTGGCCGTTCCTCATGAAGAGGCCCTACGCATC CGTGACGACGTGGCCTTTTTTCAGGCCGTACGCTCCGCCCTGGTGAAACGCGCGCCTCTTGACGCCCGTCCCCAAGAAGA ATTGGATTACGCCCTTCGCCAGTTGGTGGATCGGGCCGTGGACCCTGAAGGAGTAGTGGATATCTTTGCGGCTGCAGGTC TTAAAAAACCAGATATTTCTATTCTTTCAGAAGAATTTCTAGCCGAAATCCAGGATATGCCTCAAAAGAATCTAGCGGTG GAACTTTTGCGTAAACTTTTGCAGGGAGAAATCCGCACCCGGCGGCGCAAAAATGTGGTTCAGGCCCGGCGTTTTTCTGA GATGCTTGAGCGCGCTCTCCGTCGCTATCAGAACCGCGCCATTGAAGCCGCCCAGGTCATTGAAGAGCTGATTGCGCTTG CCCGCGAGATGCGTAAGTCCGACCGAAGAGGGGAAGAATTGGGTTTAAGCGAGGAAGAGGTGGCCTTTTACGATGCGCTT GCGGCCAACGAGAGCGCGGTGGAAGTCTTGGGAGATAAAACTTTGCGAAAGATCGCCCAGGAGCTGGTGCGCCTGGTACG AGAAAATGTCACCGTGGATTGGGCCCAGCGCGAAAATGTAAGGGCTTATTTGAGGGTTCTGGTGAAACGCACCCTTCGTA AATATGGTTACCCGCCGGACAAACAGGAAGAGGCCACGCAGACGGTGCTCAAACAGGCCGAAGTTCTGGGCGGGGAGGTT GTAGAGTAG Protein sequence : MAESEVESAALAWLESLGWQIKHGPEIAPGEPFAERDDYQEVILPQRLKDALARLNPELPIEALDEAFRKLVNPPGATVE ARNRAFHRMLVDGVTVEYRREDGSIAGAQARVIDFDDSENNDFLAVNQFTVTEGRHTRRPDIVLFVNGLPLVIIELKNPA DEEATIWTAYQQLQTYKAELPTLFAFNELLVISDGLEARMGTLTAGREWFKPWRTISGERVEDEGVLQLEVLLKGVFDLE RFLELIRDFMVYEDDGGRLSKKVAGYHQFHAVRVAVRETLRAAALAKDEGLRVREEIGRYEVRGQGGRPGDRRIGVVWHT QGSGKSLTMVFYAGRIIREPAMQNPTVVVLTDRNDLDDQLFGVFSRCQELLRQEPVQAKSRAHLRELLSREAGGIIFTTI QKFFPDEKGDQHPLLSSRRNIVVIADEAHRSQYDFIDGFARHIRDALPNASFIAFTGTPIELEDRNTRAVFGDYISIYDI QRAVEDGATVPIYYESRLAKLALPKELKPKIDEEFEEVTEREEVERKEKLKTKWAQLEAIVGAEPRLRMIAKDIVKHFER RLEALDGKGMIVCMSRRICVDLYNQIIHLRPDWHHEDDDKGVIKVVMTGSASDPPEWQPHIRNKERREFLARRFRDPNDP LKLVIVRDMWLTGFDCPSLHTMYIDKPMRGHGLMQAIARVNRVFRDKPGGLVVDYIGLARELKQALAVYTESGGKGRTAL DQEEAVAVMQEKYEICCDLFHGFDWSAWKTGTPEERLALLPAAQEHILAQPDGKDRFVKAVLELSKAFALAVPHEEALRI RDDVAFFQAVRSALVKRAPLDARPQEELDYALRQLVDRAVDPEGVVDIFAAAGLKKPDISILSEEFLAEIQDMPQKNLAV ELLRKLLQGEIRTRRRKNVVQARRFSEMLERALRRYQNRAIEAAQVIEELIALAREMRKSDRRGEELGLSEEEVAFYDAL AANESAVEVLGDKTLRKIAQELVRLVRENVTVDWAQRENVRAYLRVLVKRTLRKYGYPPDKQEEATQTVLKQAEVLGGEV VE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 52 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 47 |
