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Name : Thein_1270 (Thein_1270) Accession : YP_004626102.1 Strain : Thermodesulfatator indicus DSM 15286 Genome accession: NC_015681 Putative virulence/resistance : Unknown Product : integron integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1332885 - 1334132 bp Length : 1248 bp Strand : - Note : COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011946:IPR002104; KEGG: cpb:Cphamn1_1145 putative transcriptional regulator, TetR family; PFAM: integrase family protein; SPTR: Putative transcriptional regulator, TetR family; TIGRFAM: integron in DNA sequence : ATGAAAAACTCCTGGCATAACTTTACTGACTATTTGAACGAACTTCCTATTTCTGAGAAAGCAAAGCCTTTTTACGTTTC ATGGGTAAAGAAAGCCCTTTCCTGGCACAACAAGGCCCAGAAGAAATCTGAACTTTCCCCTATATCGGAAAACAATAGAA AGCGCTTTATAAAATTTCTTGAAACCCGTTATGAACCATGGCAGGTCGCCCAGGCCGAAGAAGCTATAAAGCTCTACAAT TACTTTATTTCGTCGGTTCAAACCTCTTCCCCTGAAAAACCAGACCAGGCGGCCTGGTCCTACATTAAAGAAGAAGCTTG CCGACTCATGCGCCTGCGTCACCTCTCTTACCGCACGGAAAAGACCTATCTCTCCTGGATCGAGAGGTTTCAGAAGTTCA CAAGTTCCAAAGCTCCCGCACGTCTCACCGCCGGAGATTTTCAGAATTTCCTGACGCACCTTGCCGTAGAACGCAGCGTA GCCCCCTCCACCCAAAATCAGGCCCTAAACGCCCTGGTTTTCCTTTATAAAAATGTATTGCAGCAGGACATCACCGCAGC CATTGACGCAGTCAGGGCCAGGGAGAAGCGTCGCCTGCCGGTAGTGCTCGAAAAAGAAGAGGTGGAACAGGTTTTGCAAT ACATGCCTTATCCGTACTATTTGATCGCCGGTTTGATGTATGGCGGAGGGCTGCGCCTAAGCGAAGCTCTAAATCTGCGT ACAAAAGACGTGGACTTTGAAAAACGGCAGATAATCGTCCGGGCCGGGAAGGGAGATAAAGACCGTGTTACTATCCTTCC AGAAAAACTTGTTGACCCTCTCTGGGAGCATCTACAAAAAGTGCGGCAGCTTTACGAGTTCGACCGCGAAGAAAACCTTC CCGGAGTTCATCTTCCTGAGGCGCTAGCGCGAAAATATCCAAACGCAGGTAAAGAATGGGCCTGGTTCTGGCTCTTTCCT TCACCCAAACTTTCCGTGGACCCTCGGACCCTAACCGTGCGGCGGCATCATCTCTACCCTACTTCGGTTCAGCGTGCTTT TAAAAAAGCGCTGGCAAAAGCAGGCCTAGAAAAACCAGCCAACGTGCACTCCCTGCGGCACAGTTTCGCCACGCACCTAC TTGAGGCCGGTTATCATATTCGCACCGTGCAGAAACTCCTGGGGCACAAACACGTGCAGACCACCATGATTTACACACAT CTTGCCTGCCAAAAGTTACTAAAAGTCCAAAGCCCGCTGGATAGATAA Protein sequence : MKNSWHNFTDYLNELPISEKAKPFYVSWVKKALSWHNKAQKKSELSPISENNRKRFIKFLETRYEPWQVAQAEEAIKLYN YFISSVQTSSPEKPDQAAWSYIKEEACRLMRLRHLSYRTEKTYLSWIERFQKFTSSKAPARLTAGDFQNFLTHLAVERSV APSTQNQALNALVFLYKNVLQQDITAAIDAVRAREKRRLPVVLEKEEVEQVLQYMPYPYYLIAGLMYGGGLRLSEALNLR TKDVDFEKRQIIVRAGKGDKDRVTILPEKLVDPLWEHLQKVRQLYEFDREENLPGVHLPEALARKYPNAGKEWAWFWLFP SPKLSVDPRTLTVRRHHLYPTSVQRAFKKALAKAGLEKPANVHSLRHSFATHLLEAGYHIRTVQKLLGHKHVQTTMIYTH LACQKLLKVQSPLDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ACF06155.1 | class 1 integrase | Not tested | Tn5036-like | Protein | 4e-65 | 50 |
| intI1 | ABZ01842.1 | IntI1 | Not tested | SGI2 | Protein | 2e-64 | 50 |
| intI1 | AGK07071.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-65 | 50 |
| intI1 | AGK07098.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-65 | 50 |
| intI | CAJ77028.1 | Integrase | Not tested | AbaR1 | Protein | 2e-64 | 50 |
| intI1 | AFV53119.1 | IntI1 integrase | Not tested | AbGRI2-1 | Protein | 2e-65 | 50 |
| intI1 | ABB48427.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-65 | 50 |
| intI1 | ACY75520.1 | integrase | Not tested | Tn6060 | Protein | 2e-64 | 50 |
| EC042_4092 | YP_006098375.1 | integrase | Not tested | Tn2411 | Protein | 5e-65 | 50 |
| intI1 | AGK36642.1 | IntI1 integrase | Not tested | AbaR26 | Protein | 2e-65 | 50 |
| intI | CAJ77082.1 | Integrase | Not tested | AbaR1 | Protein | 2e-65 | 50 |
| intI1 | ACY75535.1 | integrase | Not tested | Tn6060 | Protein | 2e-64 | 50 |
| intI | YP_001844881.1 | integrase | Not tested | AbaR20 | Protein | 3e-65 | 50 |
| intI1 | AGF35060.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-65 | 50 |
| intI1 | AGF34986.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-64 | 50 |
| intI1 | YP_005797130.1 | integrase | Not tested | AbaR4e | Protein | 3e-65 | 50 |
| intI1 | AGK06930.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-65 | 50 |
| intI1 | AGF35026.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-64 | 50 |
| intI1 | YP_005797145.1 | integrase | Not tested | AbaR4e | Protein | 3e-65 | 50 |
| intI1 | AGK06967.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-65 | 50 |
| intI1 | CAB46685.1 | DNA integrase | Not tested | Not named | Protein | 2e-64 | 50 |
| intI1 | ACN81019.1 | IntI1 integrase | Not tested | AbaR5 | Protein | 3e-65 | 50 |
| unnamed | AAL08437.1 | Tn21 integrase IntI1 | Not tested | SRL | Protein | 1e-64 | 50 |
| intI1 | AAK02045.1 | integrase | Not tested | SGI1 | Protein | 2e-64 | 50 |
| intI1 | AGK07013.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-65 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Thein_1270 | YP_004626102.1 | integron integrase | VFG1028 | Protein | 8e-65 | 50 |
