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Name : Thein_R0030 (Thein_R0030) Accession : YP_004625922.1 Strain : Thermodesulfatator indicus DSM 15286 Genome accession: NC_015681 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1146430 - 1146885 bp Length : 456 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR020081:IPR000037; KEGG: ate:Athe_0463 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; tmRNA as predicted by Rfam (RF00023), score 220.13; IMG reference g DNA sequence : ATGGAAAAGACAGTTTGCACCAACAAAAAGGCTCGGCACCTTTATGACATTGAAGAAACCATTGAAGCGGGCATGGTGCT CCTTGGGCCAGAGGTAAAATCTTTAAGGCTTGGGCGGGCTAATTTGGCTGATAGTTTTGCCCGTATAAAAGATGGCGAAG TATATCTTTACAACGTCCATATCAGTCCTTATCCTTTTAGTCGTGAGGCGCAGGTGCTTGACCCGACGCGCACACGCAAG CTCCTTTTAAAGAAACAGGAGATAAGACGGCTCCTTGGCAAGGTACAGCAAAAAGGTTATACTCTAATTCCTTTAAGGAT TTATTTTCGGGATGGTAAAGCCAAGGTAGAGTTAGCCTTAGCCAAGGGAAAGAAGGTTTATGACCGGCGCGAAACCATAC GCCGCCGGGATGTTGAGCGCGAGCTAAGGCGCCGTTACAAAGGGCGTATAAAATAA Protein sequence : MEKTVCTNKKARHLYDIEETIEAGMVLLGPEVKSLRLGRANLADSFARIKDGEVYLYNVHISPYPFSREAQVLDPTRTRK LLLKKQEIRRLLGKVQQKGYTLIPLRIYFRDGKAKVELALAKGKKVYDRRETIRRRDVERELRRRYKGRIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-25 | 52 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-23 | 51 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 6e-21 | 47 |
