Gene Information

Name : PYCH_09080 (PYCH_09080)
Accession : YP_004623865.1
Strain : Pyrococcus yayanosii CH1
Genome accession: NC_015680
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 801163 - 802320 bp
Length : 1158 bp
Strand : -
Note : -

DNA sequence :
ATGAGGTTCTCAACCAAAGCCATCCATGTCGGTGAAGATCCCGAGAGCATGCAGCACGGCGACGTTGTTTCCCCCATCCA
CCTCTCAACCACCTTCGCGAAGAGGAGCATAAGGGAGGTCGAGGAAGGCTACGTCTATTCGAGGAGCGGCAACCCCACGA
GGGACGCACTTGAGAGAAAGCTGGCAGCGCTTGAGAACGCAGAGTACGGGCTGGCGTTTTCTTCAGGACTTGCCGCCGAA
TCCACGATACTCCTTGCCCTCCTCAAGAAGGGCGACCACGTAATAGCTTTCGACGATCTCTACGGCGGAACGAAGAGGCT
CTTCAACCAGGTGATGGAGCGCTTCGGCATCGAGTTTACCTACGTTGACGCGAGGGAGCCGGGGAACGTGAGGAGGGCGA
TAAGGGAGAACACGAGGATGGTCTGGCTCGAAACGCCAACGAACCCCCTATTGAAGCTGGCGGACATAAGAGCAGTAGCC
GAGATCGTCCACGAGAGAGACCTAATCGTGGTCGTAGACAACACCTTTGCCAGTCCTTACTTCCAAAACCCCCTTGACCT
TGGGGCGGATATAGTGCTCCACAGCGTCACCAAGTACCTCGGCGGGCATTCAGATGTTGTCGGCGGGGCTGTGATGGTCA
ACGACGACGAAATCTATGAGAGGCTCAAGTTCCACCAGAACGCGGTTGGGGCAATTCTGTCACCTTTTGACTCCTGGCTG
GTAATGAGGGGCATCAAAACGCTCGCAGTCAGGATGGAGAGGCACGAGAAGAACGCCATGACGATTGCGAGGTATCTTGA
GGAGCACCCGATGGTTGAGCGCGTTTATTACCCCGGCCTGCCCTCACATCCACAGCACGAGCTCGCGAAGAGGCAGATGA
AGGGATTTGGTGGGATGCTCTCCTTCGAACTCAAAGGAGGACTGGAAGAGGCAATAAAGTTCGTGGAGAGCCTTGAGATA
TTCGCCTTGGCTGAAAGCCTCGGCGGCGTCGAGTCGCTCATAGAACTGCCAGCAATCATGACCCACGCATCGGTTCCAAG
GGATGAGAGGGAGAAGGTCGGCATAAGGGACTCGCTCATCAGAGTTTCAGTCGGGATAGAGGACGTTGAAGACCTCATCG
AGGACCTTGAGAGGGGCTTTGAGGCGGTGAGAGCATGA

Protein sequence :
MRFSTKAIHVGEDPESMQHGDVVSPIHLSTTFAKRSIREVEEGYVYSRSGNPTRDALERKLAALENAEYGLAFSSGLAAE
STILLALLKKGDHVIAFDDLYGGTKRLFNQVMERFGIEFTYVDAREPGNVRRAIRENTRMVWLETPTNPLLKLADIRAVA
EIVHERDLIVVVDNTFASPYFQNPLDLGADIVLHSVTKYLGGHSDVVGGAVMVNDDEIYERLKFHQNAVGAILSPFDSWL
VMRGIKTLAVRMERHEKNAMTIARYLEEHPMVERVYYPGLPSHPQHELAKRQMKGFGGMLSFELKGGLEEAIKFVESLEI
FALAESLGGVESLIELPAIMTHASVPRDEREKVGIRDSLIRVSVGIEDVEDLIEDLERGFEAVRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-82 50
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-83 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-69 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PYCH_09080 YP_004623865.1 cystathionine gamma-lyase BAC0207 Protein 6e-69 43