Gene Information

Name : PYCH_09050 (PYCH_09050)
Accession : YP_004623862.1
Strain : Pyrococcus yayanosii CH1
Genome accession: NC_015680
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 797917 - 799971 bp
Length : 2055 bp
Strand : +
Note : -

DNA sequence :
ATGGTGGATGAGGAGACCCCTTCCATGGAGGGGCACGGTGAGATGAAGATGAAGAAAGGGGAAGACCATGAAGCTGAAGA
TACGGGCCACGAGAGTCACAAGCACTCCCACGCCGAGCACCACAGGATGATGATGGAGGACTTCAAAAAGCGCTTTATAG
TCTCCGTGATACTGACGGTCCCAATCCTGATCCTGTCGCCGCTGATACAGAGGTTTCTGGGCTTTGAGCTGACTTTTCCG
GGCGATCACTACGTTCTCTTTGGCCTCTCCTCTGTGGTCTACTTCTACGGCGGCTGGCCGTTCCTCACGGGCATGAGGGA
CGAGCTGAAGAAAAAACTGCCGGGCATGATGACGCTGATAGCGCTGGCAATCACCGTTGCATTCTTCTACAGCGTTGCGG
TGACCTTTGGCCTGCCGGGTAAGACCTTCTACTGGGAGCTTGCGACGCTTATCGACATCATGCTCCTTGGCCACTACATC
GAGATGCGCTCCGTTCTCGGCGCTTCAAGGGCATTGGAAGAGCTCATAAAGCTCATGCCCACTGAGGCTCATCTCGTAAC
GCCCGAGGGAATAAAGGACGTCCCGGTCAGCGAGCTGAAGAAAGGCGATATAGTCCTTGTCAAACCCGGTGAGAAAATAC
CTTCTGATGGTATCATAATAGAAGGAGAAACCAGCGTAAACGAAGCTATGTTGACAGGTGAGTCGAAGCCCGTCTATAAG
AAACCGGGCGATGAAGTCATCGGAGGCTCCATAAACCTTGAGGGAGCGATAAAGGTCAGGATAGAGAAGACCGGAAAGGA
TACCTACCTGATGCAGGTCGTTGAGCTCGTCAGGCAGGCACAGGAGACAAGGTCAAGGACGCAGGATTTAGCTAACAGGG
CTGCCTTCTACCTCACGCTCATAGCTATAACTGCTGGAACAATAACCCTCGGCACGTGGCTCTACCTCGGCAAGCCCTTC
GTCTTCGCCCTTGAGAGGATGGTCACGGTAATGGTCATAACGTGCCCGCACGCGCTTGGCTTAGCTGTTCCGCTGGTCGT
CTCGGTGTCAACGTCAATCTCGGCCAAGAAGGGAGTCCTCATAAGGAACAGGGAGGCGTTTGAAAGAGCGAAGGACGTTC
AGGTGGTCGTCTTCGACAAGACCGGGACGCTGACCGAAGGCAAGTTCGAAGTAACCGACATAATGACCCTGGACGAGCTC
GGTGAAGAGGAGATCCTGAAGTATGCGGCGGCACTTGAGTCCCACTCAAACCACCCGATAGCCCAGGGAATAGTTGAGAA
AGCCAAGGAGCTCGGCCTTGAGGTCTACGAGGTAGCTGAATCAAAAGTTCTTCCGGGCAAGGGTGTCCAGGGCGTCATCA
ACGGAAAGGAAGTCCTCGTCGTAAGCCCGGGATTCCTGAAGGAGAACGGCCTGTGGATGGAGGACGAGCGCGTCAATAAA
GTCTTGGAGCAGGGTAAGACCGTTGTCTTCCTGGTCATTGATGGAAAGCTCGTGGGTGCTCTGGCTTTAGCAGATAAGAT
AAGGCCCGAGTCAAGGGAGGCCATTGAAAAGCTCCACGAGATGGGCATAAAGGCCTACATGCTCACCGGCGACAACGCCA
AGGTCGCAAAGTGGGTGGCTGAGGAGCTCGGCCTCGACGGCTTCTTCGCTGAAGTTTTACCTCACCAGAAGTCGGAGAAA
ATTAAGGAGCTCCAGGAGCAGGGCTACACAGTGGCGATGGTGGGCGACGGTATAAACGATGCCCCGGCTCTGATTCAAGC
TGATGTTGGAATAGCCATCGGGGCAGGAACTGACGTGGCGATAGAGAGCGCCGACATAATCCTCGTCAAGAACGACCCGA
GGGACGTTATAACGGCAATACACCTCGCAAGGGCTACCTATAAGAAGATGGTTCAGAATTTGGCATGGGCAACAGGATAC
AACACATTTGCAATTCCTCTGGCTGCGGGTGTCCTCTACAACTATGGGGTACTGTTAAGTCCAGCCGTAGGTGCTTTGTT
AATGAGCTTGAGCACGGTGATAGTGGCTATAAACGCGAAGTTCTTGAAGGTCTGA

Protein sequence :
MVDEETPSMEGHGEMKMKKGEDHEAEDTGHESHKHSHAEHHRMMMEDFKKRFIVSVILTVPILILSPLIQRFLGFELTFP
GDHYVLFGLSSVVYFYGGWPFLTGMRDELKKKLPGMMTLIALAITVAFFYSVAVTFGLPGKTFYWELATLIDIMLLGHYI
EMRSVLGASRALEELIKLMPTEAHLVTPEGIKDVPVSELKKGDIVLVKPGEKIPSDGIIIEGETSVNEAMLTGESKPVYK
KPGDEVIGGSINLEGAIKVRIEKTGKDTYLMQVVELVRQAQETRSRTQDLANRAAFYLTLIAITAGTITLGTWLYLGKPF
VFALERMVTVMVITCPHALGLAVPLVVSVSTSISAKKGVLIRNREAFERAKDVQVVVFDKTGTLTEGKFEVTDIMTLDEL
GEEEILKYAAALESHSNHPIAQGIVEKAKELGLEVYEVAESKVLPGKGVQGVINGKEVLVVSPGFLKENGLWMEDERVNK
VLEQGKTVVFLVIDGKLVGALALADKIRPESREAIEKLHEMGIKAYMLTGDNAKVAKWVAEELGLDGFFAEVLPHQKSEK
IKELQEQGYTVAMVGDGINDAPALIQADVGIAIGAGTDVAIESADIILVKNDPRDVITAIHLARATYKKMVQNLAWATGY
NTFAIPLAAGVLYNYGVLLSPAVGALLMSLSTVIVAINAKFLKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 6e-98 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PYCH_09050 YP_004623862.1 copper-translocating P-type ATPase BAC0629 Protein 0.0 70
PYCH_09050 YP_004623862.1 copper-translocating P-type ATPase BAC0079 Protein 4e-138 49
PYCH_09050 YP_004623862.1 copper-translocating P-type ATPase BAC0383 Protein 3e-111 44
PYCH_09050 YP_004623862.1 copper-translocating P-type ATPase BAC0101 Protein 1e-93 41