Gene Information

Name : PYCH_08680 (PYCH_08680)
Accession : YP_004623825.1
Strain : Pyrococcus yayanosii CH1
Genome accession: NC_015680
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 765370 - 766533 bp
Length : 1164 bp
Strand : -
Note : -

DNA sequence :
ATGAGGTTCTCAACTAAAGCTATTCACGTTGGCGAAAATCCAAGAGAAATGCAGTACGGAGATGTTGTCTCTCCGATTCA
CCTCTCGACAACTTTTGCAAAGAAGAGCGTGAGGGAAGTTGAGAAGGGCTACGTTTACTCAAGGACCGGCAATCCCACAA
GGGACAGCCTTGAGAAAAAGCTGGCGGCACTTGAAAACGCCAAGTATGGGTTAGCATTTTCCTCGGGGTTGGCGGCTGAG
TCAACAATACTCTTGGCTCTGCTCAAAAAAGGAGACCACGTGGTTGCTTTTGACGATCTCTATGGCGGAACCAAGAGGCT
GTTCAATCAAGTTATGGAGCGCTTTGGGATTGATTTCACCTACGTGGACGCAAGAGATCCTGAGAACGTTAGAAAGGCGA
TAAAAGAGAACACAAAGATGATCTGGCTCGAAACTCCCACAAATCCCCTCTTAAAGCTGGCTGACATTAAGGCAATATCC
GAGATTGCACATGAGAGGAATATAATCGTGGTAGTGGATAATACATTTGCGAGTCCATACTTCCAGAATCCCCTTGACTT
AGGTGCAGATATAGTCCTCCATAGTGTTACCAAGTATCTCAGCGGGCACTCCGACGTTGTGGGTGGAGCGGTTATGCTAA
ACGACGATGAGCTTTATGAAAAGCTAAAGTTCCACCAGAACGCAGTGGGTGCAATTTTGTCACCCTTTGACTCTTGGCTC
GTTATGAGGGGGATTAAGACACTCGCCGTCAGGATGGAGAGGCACGAGAAAAACGCTATGAGAATTGCAGAGTATCTAGA
AGAGCATCCGCTGGTTGAGAAAGTTTACTATCCTGGTTTACCGTCGCATCCACAGCATGAACTCGCAAAGAGGCAGATGC
GTGGCTTTGGTGGAATGCTCTCATTCGAACTCAAAGGGGGGCTGAAGGAGGCAGTGAAATTCGTGGAGAGCCTCGAAATC
TTTGCGCTGGCTGAAAGCCTCGGTGGGGTGGAATCCCTAATCGAGCTCCCGGCTTTGATGACCCATGCATCACTTCCAAA
AGAGGAGAGGGAGAAAGTTGGCATAAAGGACTCCCTTATCAGGGTCTCAGTTGGAATAGAAGATGTTGAGGATCTAATTG
AGGACCTGGAGAGAGGCTTTGAGGCGGTGAGAAGATTATACTGA

Protein sequence :
MRFSTKAIHVGENPREMQYGDVVSPIHLSTTFAKKSVREVEKGYVYSRTGNPTRDSLEKKLAALENAKYGLAFSSGLAAE
STILLALLKKGDHVVAFDDLYGGTKRLFNQVMERFGIDFTYVDARDPENVRKAIKENTKMIWLETPTNPLLKLADIKAIS
EIAHERNIIVVVDNTFASPYFQNPLDLGADIVLHSVTKYLSGHSDVVGGAVMLNDDELYEKLKFHQNAVGAILSPFDSWL
VMRGIKTLAVRMERHEKNAMRIAEYLEEHPLVEKVYYPGLPSHPQHELAKRQMRGFGGMLSFELKGGLKEAVKFVESLEI
FALAESLGGVESLIELPALMTHASLPKEEREKVGIKDSLIRVSVGIEDVEDLIEDLERGFEAVRRLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-82 50
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-81 49
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-68 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PYCH_08680 YP_004623825.1 cystathionine gamma-lyase BAC0207 Protein 8e-69 43