Gene Information

Name : PYCH_10800 (PYCH_10800)
Accession : YP_004624033.1
Strain : Pyrococcus yayanosii CH1
Genome accession: NC_015680
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 951188 - 952195 bp
Length : 1008 bp
Strand : -
Note : -

DNA sequence :
ATGGGTAAGCTCGATGTGATTATGGAGAAGGGTACCGAGAGGCTGAAGAGGGGCTTCGCGAAGATGGTTAAAGGTGGCGT
CATAATGGACGTTACCAACGCGGAACAGGCTCGCATAGCGGAAGAGGCTGGTGCCGTTTCTGTCATGGCCCTTCACAAGG
TTCCCGCCGACATCAGGAAGGCAGGTGGAGTGGCCAGGATGGCGCCCATCGAGAAGATACAGGAGATAATGGATGCTGTC
ACGATCCCGGTCATGGCGAAGGTCAGGATTGGCCACGAGGCCGAGGCGAGGATACTTGAGGCCCTCGGCGTTGATATGAT
AGACGAGAGCGAAGTTCTAACTCCCGCAGACCCGTTCTTCCACATATACAAGAAGAAGTTCACCGTCCCCTTTGTCTGCG
GCGCCAGGAACCTTGGCGAGGCCGTGAGGAGGATATGGGAAGGGGCGGCGATGATAAGGACCAAGGGAGAGGCTGGGACC
GGCAACATCATCGAGGCGGTCAGGCACGTTCGCCTTGTCAACGAGAACATAAGGCTCATACAGAGGATGACGGACGAGCA
GATTTACGGTGTAGCAGAGAGGTTCGCGGAGCCCTATCTGAGGCTGGCCTTCAGCGTCAAGGAGATCAGTGGCCTACCCA
AGCAGGTCCTTGAAAACGAGCCCATCTACGAGGGCTTCACCTATAGGGAGATAGTCGAGGGCCTTTACAAGATACTGCTC
GAGATTAAGAAGCTCGGCAGGCTTCCCGTCGTTAATTTCGCAGCCGGTGGCGTTGCCACGCCCGCGGATGCCGCTTTAAT
GATGGCGATGGGAATGGACGGCGTATTCGTGGGTAGTGGAATATTCAAGAGCTCCAACCCGCCAAAGATGGCGAGGGCAA
TCGTCGAGGCCGTCAATCACTGGGACGAGCCCGATGTCCTTGCGGAGATAAGCAGGGAGATAGGAGAGCCCATGCGCGGC
CAGGACATAGCAGAGCTCGCCGTGAGGATGGAGGAGAGGGGCATCTAA

Protein sequence :
MGKLDVIMEKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVSVMALHKVPADIRKAGGVARMAPIEKIQEIMDAV
TIPVMAKVRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFTVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGT
GNIIEAVRHVRLVNENIRLIQRMTDEQIYGVAERFAEPYLRLAFSVKEISGLPKQVLENEPIYEGFTYREIVEGLYKILL
EIKKLGRLPVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPKMARAIVEAVNHWDEPDVLAEISREIGEPMRG
QDIAELAVRMEERGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-58 54
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-58 53
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 7e-58 53