Gene Information

Name : vicR (HMPREF0833_10904)
Accession : YP_004621863.1
Strain : Streptococcus parasanguinis ATCC 15912
Genome accession: NC_015678
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 932897 - 933598 bp
Length : 702 bp
Strand : -
Note : COG: COG0745

DNA sequence :
ATGAAAAAAATATTAGTAGTTGATGATGAAAAACCAATTTCAGACATTATCAAATTTAACATGGCGAAAGAGGGCTATGA
GGTATTGACAGCCTTTGATGGTCGGGAAGCATTGGAAGTCTTTGCAGCTGAAAATCCAGATGTTATTATTCTAGATTTGA
TGTTACCAGAGATTGATGGTTTGGAAGTGGCGCGGACGATTCGTAAGACCAGTAATGTGCCGATCATTGTCCTATCTGCC
AAGGATACGGAATTTGATAAGGTCATTGGGCTTGAAATTGGGGCAGATGACTATGTGACCAAACCCTTCTCGAATCGGGA
ATTGCAAGCGCGTGTGAAAGCCTTGTTGCGTCGTTCTGAGTTTGCGGCTGATCCTCAGCTTGAAAATGATGCCGATACGG
AAATTGTCATTGGTGATCTTCACATTCTTCCAGATGCTTTTTTGGTTCAAAAAGGCAACAAAGAATTGGACTTGACCCAT
CGCGAATTTGAATTGCTCTATCACCTTGCGACCCATGTTGGTCAAGTGATGACCCGTGAGCACCTTCTTGAGACGGTGTG
GGGCTATGATTACTTTGGTGATGTTCGGACAGTGGACGTGACGGTTCGTCGTTTGCGTGAAAAAATCGAGGACACACCGG
GACGTCCAGAATATATCTTGACTCGCCGTGGTGTTGGATATTATATGAGAAACAATGATTGA

Protein sequence :
MKKILVVDDEKPISDIIKFNMAKEGYEVLTAFDGREALEVFAAENPDVIILDLMLPEIDGLEVARTIRKTSNVPIIVLSA
KDTEFDKVIGLEIGADDYVTKPFSNRELQARVKALLRRSEFAADPQLENDADTEIVIGDLHILPDAFLVQKGNKELDLTH
REFELLYHLATHVGQVMTREHLLETVWGYDYFGDVRTVDVTVRRLREKIEDTPGRPEYILTRRGVGYYMRNND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-34 44
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_004621863.1 DNA-binding response regulator NC_012469.1.7685629. Protein 2e-82 82
vicR YP_004621863.1 DNA-binding response regulator HE999704.1.gene2815. Protein 2e-50 56
vicR YP_004621863.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 5e-51 55
vicR YP_004621863.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 3e-51 55
vicR YP_004621863.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 2e-51 55
vicR YP_004621863.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 3e-51 55
vicR YP_004621863.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 3e-51 55
vicR YP_004621863.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 3e-51 55
vicR YP_004621863.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 3e-51 55
vicR YP_004621863.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 4e-51 55
vicR YP_004621863.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 3e-51 55
vicR YP_004621863.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 3e-51 55
vicR YP_004621863.1 DNA-binding response regulator NC_012469.1.7686381. Protein 9e-41 49
vicR YP_004621863.1 DNA-binding response regulator AE016830.1.gene1681. Protein 1e-42 47
vicR YP_004621863.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 2e-36 45
vicR YP_004621863.1 DNA-binding response regulator HE999704.1.gene1528. Protein 5e-31 44
vicR YP_004621863.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 2e-36 44
vicR YP_004621863.1 DNA-binding response regulator AM180355.1.gene1830. Protein 2e-34 43
vicR YP_004621863.1 DNA-binding response regulator AE000516.2.gene3505. Protein 1e-30 43
vicR YP_004621863.1 DNA-binding response regulator NC_014475.1.orf0.gen Protein 3e-35 42
vicR YP_004621863.1 DNA-binding response regulator NC_005054.2598277.p0 Protein 3e-35 42
vicR YP_004621863.1 DNA-binding response regulator AE015929.1.gene1106. Protein 2e-30 42
vicR YP_004621863.1 DNA-binding response regulator AF162694.1.orf4.gene Protein 4e-29 41
vicR YP_004621863.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 1e-35 41
vicR YP_004621863.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 1e-35 41
vicR YP_004621863.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 1e-35 41
vicR YP_004621863.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 1e-35 41
vicR YP_004621863.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 1e-35 41
vicR YP_004621863.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 1e-35 41
vicR YP_004621863.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 1e-35 41
vicR YP_004621863.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 1e-35 41
vicR YP_004621863.1 DNA-binding response regulator CP000647.1.gene4257. Protein 1e-30 41
vicR YP_004621863.1 DNA-binding response regulator CP001138.1.gene4273. Protein 6e-31 41
vicR YP_004621863.1 DNA-binding response regulator CP004022.1.gene3215. Protein 3e-33 41
vicR YP_004621863.1 DNA-binding response regulator BAC0533 Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_004621863.1 DNA-binding response regulator VFG1389 Protein 4e-29 45
vicR YP_004621863.1 DNA-binding response regulator VFG1702 Protein 1e-34 44
vicR YP_004621863.1 DNA-binding response regulator VFG1563 Protein 2e-34 43