|
Name : lysS (HMPREF0833_10866) Accession : YP_004621825.1 Strain : Streptococcus parasanguinis ATCC 15912 Genome accession: NC_015678 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 897724 - 899214 bp Length : 1491 bp Strand : - Note : COG: COG1190 DNA sequence : ATGACTACTGAACATATGGAAGAATTGAATGACCAGCAGATTGTCCGTCGTGAGAAAATGGCGGCCCTTCGTGAACAAGG AATCGATCCATTTGGGAAGCGATTCGAACGTACTGCAAATTCAGGTCATTTAAAAGAAAAATATTCAGAATTAGATAAAG AACAACTCCACGACTTGAACGAAACAGCTATTATTGCTGGTCGTCTTGTTACCAAACGTGGAAAAGGAAAGGTTGGCTTT GCCCATCTTCAAGACCGTGAAGGTCAAATTCAGATCTACGTTCGTAAGGATGCTGTTGGAGAAGAAAACTACGAGATCTT CAAAAAAGCAGACCTTGGAGATTTCCTTGGTGTTGAAGGGGAAATCATGCGCACAGACATGGGTGAACTTTCGATTAAAG TAACTCATATCACTCACTTGTCAAAAGCCCTTCGTCCCTTGCCTGAAAAATTCCACGGACTTTCAGACGTTGAAACCATC TATCGCAAACGTTATTTGGATTTGATTTCAAACCGTGAAAGCTTCGAACGCTTTGTAACCCGTTCAAAAATCATCTCTGA AATCCGTCGTTATTTAGATGGTCAAGGATTCCTTGAAGTGGAAACACCAGTGCTTCACAATGAAGCTGGTGGTGCGGCTG CCAAACCATTTATCACTCACCACAATGCACAAAACATTGACATGGTGCTTCGAATCGCGACGGAGCTTCACTTGAAACGT TTGATTGTTGGTGGGATGGAACGCGTTTACGAAATCGGACGGATCTTCCGTAACGAAGGAATGGATGCCACTCACAACCC TGAATTCACTTCGATCGAAGTGTACCAAGCTTACGCTGACTTCCACGATATTATGGACTTAACAGAAGGCATTATCCAAC ATGCTGCGAAAGCGGTCCATGGTGATGGTCCAATTGACTACCAAGGAACAGAGATCAAAATCAATGAACCATTCAAACGG GTTCATATGGTTGATGCGATTAAAGAAATCACAGGTGTTGACTTCTGGCAAGACATGACCTTTGAAGAAGCTGTAGCACT GGCAAACGAAAAACATGTACCAGTTGAAAAACACTACACAGAAGTGGGACAAATTATCAATGCCTTCTTCGAAGAATTCG TTGAAGAAACTTTGACACAACCAACTTTTGTTTATGGTCACCCAGTAGCAGTGTCACCTTTGGCTAAGAAAAATCCAGAA GACCCACGCTTCACTGACCGTTTCGAACTTTTCATCATGACTAAAGAGTATGCGAATGCCTTTACGGAATTGAATGATCC GATCGATCAATTGCAACGGTTCGAAGCGCAAGCGCGTGCTAAAGAATTGGGAGATGATGAAGCTACAGGCATCGACTATG ACTATGTTGAAGCCCTCGAATATGGTATGCCACCAACAGGTGGACTTGGAATTGGTATTGACCGTCTCGTTATGTTGTTG ACAAATGTAACAACAATTCGCGACGTCCTTCTCTTCCCAACTATGAAATAA Protein sequence : MTTEHMEELNDQQIVRREKMAALREQGIDPFGKRFERTANSGHLKEKYSELDKEQLHDLNETAIIAGRLVTKRGKGKVGF AHLQDREGQIQIYVRKDAVGEENYEIFKKADLGDFLGVEGEIMRTDMGELSIKVTHITHLSKALRPLPEKFHGLSDVETI YRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKR LIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMDLTEGIIQHAAKAVHGDGPIDYQGTEIKINEPFKR VHMVDAIKEITGVDFWQDMTFEEAVALANEKHVPVEKHYTEVGQIINAFFEEFVEETLTQPTFVYGHPVAVSPLAKKNPE DPRFTDRFELFIMTKEYANAFTELNDPIDQLQRFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLL TNVTTIRDVLLFPTMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-110 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004621825.1 | lysine--tRNA ligase | VFG1668 | Protein | 4e-110 | 47 |
