Gene Information

Name : HMPREF0833_10537 (HMPREF0833_10537)
Accession : YP_004621496.1
Strain : Streptococcus parasanguinis ATCC 15912
Genome accession: NC_015678
Putative virulence/resistance : Unknown
Product : phage integrase family site-specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 550527 - 551738 bp
Length : 1212 bp
Strand : -
Note : COG: COG0582

DNA sequence :
ATGAGTAAAAAATATAAATGCGTAAGTCGAAATAAGAAAGGAAAAATTTACTATGAGGTTGAATTCAGTGTAGATCCATC
TACGGGTGACCGAAAGAGATTTAGGGTTAAATCTTATAAAGATCAATTCGGGATTGATTTTAAAACAGAAAAGCAAGCCT
TTGACGAAGTCTGTAGGATAAGAACTGAATACAATGCTAAAATAGCTAGTGCTAGTACAAAAAGACCACAATTAGATATT
CCATTTTCAAAATTTATGGAAGATGTCTATTTGCCTTATTATAAGAAAACTGTTCAGCCCGTAACCTATCAAACTGCTTA
TCCTCAGTATAAGACTTTTATTGAAGTTTTTGCTGACAAGAAATTGTCTGAAATCAATGTTCGGGAATGCGAAGATTTTA
GATTATCTTTAATGGAAGACTACTCTCCAAACTACGCAAAAGGACTTTGGTGTAAACTGAAGAAGTGCTTAAATTATGCA
GAACGCTTGGAATACATCGAGAATAATCCTTGTCGAAAGTTAGACAATCCTAAAGGAGAAAAACCGAAAACTGAATTTTG
GACTGTAGAGGAACTTGATAAGGTATTAAAAACTTTTGATCAGACAGTTTATGAAGAGAGGCAGTTTTATACGGCTATCT
GGCTTTATTTTATGACGGGGATGCGAGTCTCTGAGGGTCTTAGTTTAAAGTGGTCAGACATAGATCTTAAAAATAAGGTT
ATTCATATTCAATCTACCCTCGAATATCAAGGGAATGGGAAATACGTTCGAAAAGAGCAGACAAAAACTAGGGCAGGAAT
GCGTTTCTTAGAAATAGATGACGAAACTGTTAAAGTGTTGCAAAATTGGAGAACTGTACAAGTGTATAATAGAGAAGATA
ATTTCGTATTAGCACGGTTTAACTCTCCAATGAACAAATCTACCTTAAGTCGAATGTTAAAAAGGCATGCACTAGTGGCT
AAGGTTCCGGTTATTACTGGGAAAGGTCTACGTCATAGTCATGATTCATTTATGATAAACGTTCTAAAAAAAGATGTTTT
GTATGTCTCGGCTCGTTCAGGAAGAACGGACAAGGCTACAACACTAAACACCTATTCTCATTTCTATGATAGACAAGTTG
TTACTGGTGGTGCTGAGATAACAGAGGCATTAGGAGAGCTGGGATTAACTGCAAATCCCGCCACAATCCCGCCAAGTAAA
GAAACCAAGTAA

Protein sequence :
MSKKYKCVSRNKKGKIYYEVEFSVDPSTGDRKRFRVKSYKDQFGIDFKTEKQAFDEVCRIRTEYNAKIASASTKRPQLDI
PFSKFMEDVYLPYYKKTVQPVTYQTAYPQYKTFIEVFADKKLSEINVRECEDFRLSLMEDYSPNYAKGLWCKLKKCLNYA
ERLEYIENNPCRKLDNPKGEKPKTEFWTVEELDKVLKTFDQTVYEERQFYTAIWLYFMTGMRVSEGLSLKWSDIDLKNKV
IHIQSTLEYQGNGKYVRKEQTKTRAGMRFLEIDDETVKVLQNWRTVQVYNREDNFVLARFNSPMNKSTLSRMLKRHALVA
KVPVITGKGLRHSHDSFMINVLKKDVLYVSARSGRTDKATTLNTYSHFYDRQVVTGGAEITEALGELGLTANPATIPPSK
ETK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1090 YP_006309892.1 integrase Not tested FWisland_1 Protein 5e-94 51
SSU05_0903 YP_001198269.1 phage integrase family site specific recombinase Not tested 89K Protein 2e-94 51
SSU98_0908 YP_001200466.1 phage integrase family site specific recombinase Not tested 89K Protein 2e-94 51