Gene Information

Name : clpL (HMPREF0833_11747)
Accession : YP_004622706.1
Strain : Streptococcus parasanguinis ATCC 15912
Genome accession: NC_015678
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit ClpL
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1868358 - 1870487 bp
Length : 2130 bp
Strand : +
Note : COG: COG0542

DNA sequence :
ATGAATAACAACTTTAACAATATGGATGATCTTTTCAATCAACTAATGGGAAATATGGGTGGTTTTCGTTCTGAAAGCCG
TCGCTACATGATCAACGGTCGTGAAGTGACACCTGAAGAATTCGCAGTTTACCGCCAAACTGGTCAACTTCCAAATGAAG
GAAGCGAGCAAGTGCAACACCATCAAGGTAAGGGAATGAAACAAGATGGGATCCTTGCAAAACTTGGTCGCAACTTGACC
GAAGAAGCTCGTGAAGGAAAATTGGATCCGGTCATCGGACGTAATAAAGAAATTCAAGAAACTGCTGAAATCTTGTCTCG
TCGTACCAAGAACAATCCTGTCCTTGTAGGGGATGCCGGTGTTGGTAAAACAGCAGTTGTAGAAGGTTTGGCACAAGCTA
TTGTGAACGGAGATGTTCCAGCTGCTATCAAGAACAAAGAAATCATCTCGATTGATATTTCTGGTCTAGAAGCTGGTACG
CAATACCGTGGTAGCTTTGAAGAAAATATTCAAAATCTGATCCAAGAAGTCAAGGCTATGGGAAATGTTATTCTCTTCTT
TGATGAAATCCATCAAATTCTTGGTGCAGGTAGCACAGGTGATGGTCAAGGGTCTAAAGGTCTTGCGGATATTATCAAAC
CTGCCCTTTCACGTGGGGAATTGACAGTCATTGGGGCAACTACTCAAGATGAATACCGTAACACCATCTTGAAGAATGCG
GCTCTTGCTCGTCGTTTCAACGAAGTGAAAGTCAATGCTCCTTCTGCTGAAGATACTTTCAAGATTCTCCAAGGGATCCG
TGATCTTTATGAAAAACACCACAATGTCATCTTGCCAGATGAAGTTTTGAAGGCAGCAGTTGATTATTCAATCCAATACA
TTCCACAACGTAGCTTGCCTGATAAGGCCATTGACTTGGTCGATGTGACAGCTGCTCACTTGGCAGCCCAACATCCAGTA
ACAGATGTCCATGCTGTGGAACATGAAATTGAAGAAGAAAAAACCAAACAAGAAGAAGCTGCTGCTAAAGAAGATTACGA
AGTAGCTTTGAAAGCAAAAGTTCGTATCGAAGAACTTGAAAAGAAAATTGCCAACCACACAGAAGACCATAAGGTAACAG
CAACAATCAACGATGTGGCTGAATCTGTAGAACGGATGACGGGTATTCCAGTTTCTCAAATGGGTGTAACCGATATCGAA
CGTTTGAAAGATATGGGTCACCGTTTGCAAACTAAGGTTATCGGTCAAGATAAAGCCGTTGAAGCAGTGGCACGTGCTAT
CCGTCGGAACCGTGCAGGATTTGACGAAGGTAACCGTCCAATCGGTAGCTTCCTCTTTGTAGGTCCTACTGGTGTCGGTA
AGACTGAGTTGGCTAAACAATTGGCTCTTGACATGTTCGGAACCAAAGATGCGATCATCCGTTTGGACATGTCAGAATAC
AGCGACCGTACAGCCGTTTCTAAATTGATTGGTACGACAGCTGGTTATGTTGGATATGATGACAATAGCAATACCTTAAC
AGAACGTGTTCGCCGTAACCCATACTCAATCGTTCTTCTTGACGAAATTGAAAAGGCGGATCCTCAAGTGATCACCCTTC
TCCTTCAAGTCTTGGATGATGGTCGTTTGACAGATGGTCAAGGGAACACGGTCAACTTCAAGAACACTGTGATTATCGCT
ACTTCAAACGCTGGCTTTGGTTACGAAGCCAACTTGACAGAAGATGCGGATAAACCAGAACTCATGGATCGTTTGAAACC
TTACTTCCGTCCAGAATTCCTCAATCGTTTCAACGCTGTCATTGAATTCTCACACTTGAGCAAGGAAGACCTTTCTAAGA
TTGTCGATTTGATGTTGGTAGATGTCAATAAGACCCTTTCTAAGAAGGAAATCGATTTGGCAGTGAGCGATGCAGCCAAA
GAATATATGACTGAAGAAGGTTATGATGAAGTGATGGGTGTTCGTCCACTCCGTCGGGTAGTTGAACAACAAATCCGTGA
CAAAGTCACAGACTTCCACTTGGATAATTTGGATGCCAAACATCTTGAAGCTAACATGGAAGATGGTGTACTTGTGATCA
GAGAAAAAGATACCAAGAAAGAAGAAAATACGGATAAAGAAGCAGAATAA

Protein sequence :
MNNNFNNMDDLFNQLMGNMGGFRSESRRYMINGREVTPEEFAVYRQTGQLPNEGSEQVQHHQGKGMKQDGILAKLGRNLT
EEAREGKLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEAGT
QYRGSFEENIQNLIQEVKAMGNVILFFDEIHQILGAGSTGDGQGSKGLADIIKPALSRGELTVIGATTQDEYRNTILKNA
ALARRFNEVKVNAPSAEDTFKILQGIRDLYEKHHNVILPDEVLKAAVDYSIQYIPQRSLPDKAIDLVDVTAAHLAAQHPV
TDVHAVEHEIEEEKTKQEEAAAKEDYEVALKAKVRIEELEKKIANHTEDHKVTATINDVAESVERMTGIPVSQMGVTDIE
RLKDMGHRLQTKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLDMSEY
SDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNTVIIA
TSNAGFGYEANLTEDADKPELMDRLKPYFRPEFLNRFNAVIEFSHLSKEDLSKIVDLMLVDVNKTLSKKEIDLAVSDAAK
EYMTEEGYDEVMGVRPLRRVVEQQIRDKVTDFHLDNLDAKHLEANMEDGVLVIREKDTKKEENTDKEAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 9e-132 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpL YP_004622706.1 ATP-dependent Clp protease, ATP-binding subunit ClpL VFG0080 Protein 5e-147 48
clpL YP_004622706.1 ATP-dependent Clp protease, ATP-binding subunit ClpL VFG0079 Protein 5e-135 45