Gene Information

Name : dexB (HMPREF0833_11160)
Accession : YP_004622119.1
Strain : Streptococcus parasanguinis ATCC 15912
Genome accession: NC_015678
Putative virulence/resistance : Unknown
Product : glucan 1,6-alpha-glucosidase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : 3.2.1.20
Position : 1212101 - 1213708 bp
Length : 1608 bp
Strand : -
Note : COG: COG0366

DNA sequence :
ATGGAACAAAAATGGTGGCATAATGCCGTAATTTACCAAGTTTATCCAAAAAGTTTCAAGGATAGTAATGGCGATGGCAT
CGGGGATCTCAAGGGGATCACGAGCAAGCTAGACTATCTGGAAAATCTAGGGATTACAGCCATCTGGCTCTCACCAGTTT
ACAAGAGTCCCATGGATGATAACGGCTATGACATCTCGGATTACGAGGATATTGCCTCCATCTTTGGTACCATGGAAGAT
ATGGAAGAATTGATCGCAGAAGGTCAGAAACGCAAGATCAAAATTATCATGGACTTGGTGGTCAACCATACCTCTGATGA
GCATGCTTGGTTTATCGAGGCGCGTGAACATCCAGACAGTCCAAAGCGGGATTTCTATATTTGGCGCGATGAACCCAATG
GCATTATTTCTGCTTTTAGTGGCTCTGCTTGGGAGTTCGATGAAGCTTCAGGCCAATACTATCTGCATAACTTTAGTAAG
AAGCAACCAGACCTTAACTGGGAAAATGAGGTGCTCCGTCATCACATCTATGACATGATGAATTTCTGGATTGACAAGGG
AATTGGTGGCTTCCGTATGGATGTGATCGATATGATCGGTAAGATTCCAGATCAGGAAATCATCAGCAATGGTCCCATGC
TCCATCCTTACTTGAAGGAAATGAATCAAGCGACCTTTGGTGATAAGGATCTGCTTACAGTGGGTGAAACTTGGGGGGCG
ACTCCAGAGATTGCCAAGCAATACTCCAATCCAAAAAATCAAGAATTGTCCATGGTTTTCCAATTTGAACACATCGGCCT
TCAATACCAACCGGGTCAACCAAAGTGGCACTACGCGAAGGAATTGGATGTACCAAAATTGAAAGAAATTTTCACCAAGT
GGCAGACGGAATTAGGAGAAGAGGAGGGCTGGAATTCCCTCTTTTGGAACAACCACGATTTGCCACGGATTGTGTCAACT
TGGGGGGATGATGGGGACTATCGTGTCAAATCTGCCAAGGCTTTAGCGATTCTGCTTCACTTGATGAAGGGAACTCCTTA
TATCTATCAAGGGGAAGAAATCGGGATGACCAACTATCCATTTAAGACCCTTGAGGACGTAGAAGATATTGAGTCGATCA
ACTATGCTCATGAAGCCTTAGAAAAAGGCGTGCCGCTCGAAGTGATCATGGATCAAATCCGCCATATTGGTCGGGACAAT
GCCCGGACACCGATGCAGTGGAATGATGAAGCAGAAGCCGGCTTTACGACAGGTCGTCCATGGCTTGCGGTCAACCCAAA
CTACAAAGAGATCAATGTGGAGGCTGCCCTAGCAGATCCAGACTCTATTTTCTATACCTACCAAGCCCTCATTGCTTTGA
GAAAGGAGTACCCTTGGCTTGTGACTGCTGATTATGAATTGGTGGACGCAGCAGACAAGGTTTTTGCCTACAAGCGGGTA
GAAGGAGAGCAAGCATATTTGGTGGTTGTCAATCTCTCCAGTCAAGAGCAAGAGTTGCCACTCGTCAATGGGGTTGAAGA
GGTTCTCATTGCCAATACCAAGGTCGAACAAGTCCTCGAATCAGGCAAGTTAGCCCCTTGGGATGCCTTCTGTGTCAAAT
TAGCCTAA

Protein sequence :
MEQKWWHNAVIYQVYPKSFKDSNGDGIGDLKGITSKLDYLENLGITAIWLSPVYKSPMDDNGYDISDYEDIASIFGTMED
MEELIAEGQKRKIKIIMDLVVNHTSDEHAWFIEAREHPDSPKRDFYIWRDEPNGIISAFSGSAWEFDEASGQYYLHNFSK
KQPDLNWENEVLRHHIYDMMNFWIDKGIGGFRMDVIDMIGKIPDQEIISNGPMLHPYLKEMNQATFGDKDLLTVGETWGA
TPEIAKQYSNPKNQELSMVFQFEHIGLQYQPGQPKWHYAKELDVPKLKEIFTKWQTELGEEEGWNSLFWNNHDLPRIVST
WGDDGDYRVKSAKALAILLHLMKGTPYIYQGEEIGMTNYPFKTLEDVEDIESINYAHEALEKGVPLEVIMDQIRHIGRDN
ARTPMQWNDEAEAGFTTGRPWLAVNPNYKEINVEAALADPDSIFYTYQALIALRKEYPWLVTADYELVDAADKVFAYKRV
EGEQAYLVVVNLSSQEQELPLVNGVEEVLIANTKVEQVLESGKLAPWDAFCVKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 2e-124 52