Gene Information

Name : Rta_08930 (Rta_08930)
Accession : YP_004617994.1
Strain : Ramlibacter tataouinensis TTB310
Genome accession: NC_015677
Putative virulence/resistance : Virulence
Product : response regulator OmpR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 923536 - 924243 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGCGGCTGCTGCTCGTCGAAGACGACGTCATGGTCGCCAGCGGCATCAAGCTGGGACTGTCCGACGCCGGCTACGCGGT
CGACTGGGTCGGCAGCGGCGAGAGGGCGGTGGAGGTGCTGCGCACCGAGGTCTTCGACGCCGCCATCATCGACATCGGCC
TGCCGCAGATGGACGGGCTGGAGCTCACCCGCCGCCTGCGCCGGCCGGAGATGCCCAGCCAGAAGCTGCCGGTGCTGATC
CTCACCGCGCGCGACGCGCTGCACGACCGGGTGCAGGGCCTGGACCTGGGCGCCGACGACTACATGGTCAAGCCCTTCGA
GCTGCCCGAGCTGCTGGCGCGGCTGCGGGCGCTGCTGCGCCGCTCCCAGGCCGCCACCTCGGCGGTGCTGAGCTTCGGGC
CGATCGAGCTGGACACGTCCACCCGGCGCGCCGGCGCGCGGCAGGAGGGCGGCGCCATCACGCCCATCGAGCTCGGCCCG
CGCGAATGGACGGTGCTGGAGTATTTGCTGATGCACGTGCCCAAGCCGGCCAGCAAGGACAAGCTGCTCCAGGCCCTGAC
CGGCTGGGACAAGGAGATCACGCCCAACGCGGTGGAGGTCTACATCTCGCGTCTGCGCGGCAAGCTCGAGCCGCACGGCG
TGGCCCTGCGGTCGATCCGCGGCTTCGGCTACCGGCTGGAGCTGCAGGGCGCCGCCGCCCCCGCGTGA

Protein sequence : 
MRLLLVEDDVMVASGIKLGLSDAGYAVDWVGSGERAVEVLRTEVFDAAIIDIGLPQMDGLELTRRLRRPEMPSQKLPVLI
LTARDALHDRVQGLDLGADDYMVKPFELPELLARLRALLRRSQAATSAVLSFGPIELDTSTRRAGARQEGGAITPIELGP
REWTVLEYLLMHVPKPASKDKLLQALTGWDKEITPNAVEVYISRLRGKLEPHGVALRSIRGFGYRLELQGAAAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rta_08930 YP_004617994.1 response regulator OmpR BAC0083 Protein 4e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rta_08930 YP_004617994.1 response regulator OmpR VFG0473 Protein 3e-30 41