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Name : kdsD (Rta_38160) Accession : YP_004620951.1 Strain : Ramlibacter tataouinensis TTB310 Genome accession: NC_015677 Putative virulence/resistance : Virulence Product : Arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 4061625 - 4062653 bp Length : 1029 bp Strand : - Note : - DNA sequence : ATGACCGCATCGACAGCCTTCGGACAGGCCGCGGCGACGGGCACGGCACCGGCCTTCGACGCCGCCCGCGCCCTCGCGCT CGCGCAGGAAACCTTTGACATCGAGGCCGCCGCCGTGCTGGGGCTCAAGGCGCGCACCGGCGCCGCCTTCGCCCGGGCCG TCGAGGCCATGCTGGCCGTGACCGGCCGCGTGGTCGTGATGGGCATGGGCAAGAGCGGCCACATCGGCCGCAAGGTGGCG GCCACGCTGGCCTCCACCGGCACGGCGGCGATGTTCGTGCACCCGGCCGAGGCCAGCCACGGCGACCTCGGCATGATCAA GCCGGCGGACCTGGTGCTGGCCATCTCCAACGGCGGCGAGAGCGACGAGATCACCGCCATCCTGCCGGTGCTCAAGCGCC TGGGCGCGCCCCTGGTGGCCATGACCGGCAACGCGCAGTCCACCCTGGCGCGCCACGCCGACATCGTGCTGGACAGCGGC GTCGCGAAGGAGGCCTGCCCGCTCAACCTGGCGCCCACGGCCAGCACCACCGCCCAGCTCGCGCTGGGCGACGCGCTGGC CGTCGCGCTGCTGGACGCGCGCGGCTTTCGCACCGAGGATTTCGCGCGCTCGCACCCCGGAGGCGCCCTGGGTCGCAAGC TGCTGACGCACCTGCGCGACGTGATGCGCGCGGGCGGCGCCGTGCCGCGCGTGGGCGCGGACACGCCTTTCACCGAGCTG ATGCGCGAGATGAGCGCCAAGGGCCTGGGCGCCTCGGCCGTGGTGGACGGCGAGGGCCGCGTGCTGGGCATCTTCACCGA CGGCGACCTGCGCCGCCTGGTCGAGAAGGGCCGGGACCTGCGCGGGCTGACGGCGCGCGAGGTGATGCATCCCAACCCCC GCGGCGTCATCCGCGACGACGTGCTGGCGGTGGAGGCGGCGGAACTGATGGAAAAGCACCGCATCAACAGCGTGCTGGTG ATCGACGACCAGGGCCGGCTGTGCGGCGCCGTGAGCAGCAACGACCTGATGCGCGCGAAAGTCATTTGA Protein sequence : MTASTAFGQAAATGTAPAFDAARALALAQETFDIEAAAVLGLKARTGAAFARAVEAMLAVTGRVVVMGMGKSGHIGRKVA ATLASTGTAAMFVHPAEASHGDLGMIKPADLVLAISNGGESDEITAILPVLKRLGAPLVAMTGNAQSTLARHADIVLDSG VAKEACPLNLAPTASTTAQLALGDALAVALLDARGFRTEDFARSHPGGALGRKLLTHLRDVMRAGGAVPRVGADTPFTEL MREMSAKGLGASAVVDGEGRVLGIFTDGDLRRLVEKGRDLRGLTAREVMHPNPRGVIRDDVLAVEAAELMEKHRINSVLV IDDQGRLCGAVSSNDLMRAKVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-54 | 47 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-54 | 47 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-54 | 46 |
