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Name : gspE (Rta_35420) Accession : YP_004620674.1 Strain : Ramlibacter tataouinensis TTB310 Genome accession: NC_015677 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3776888 - 3778279 bp Length : 1392 bp Strand : + Note : - DNA sequence : ATGGCCCGTTATCCCCTGCCTTATGCCTTCGCCCGCGGCAGCCAGCTGCTGCTGGAGGAAGACGGCGACTCCCTGACCCT GTGGCACGCCGGCATGCCGCCCGGCAGCGCCTGGACCGAGGTGATGCGCAAGTGGCGCGTGCGCGCCCTGCAGCAGCTCG ATGCCTCCGCGCTGGCGCAGCGCATTAGCGCGGCCTATGCCCAGGGCGAGTCCAGCGCGGCCACCGTCGTGAGCGAAGTG CAGAACGACGCCGACCTCTCGCGCATCATGCAGGAGCTGCCGGCGGTGGAAGACCTGCTGGAGACCAGCGACGACGCGCC CATCATCCGCATGCTGAACGCGCTGCTGACGCAGGCCGCGCGCGACGGCGCCAGCGACATCCACATCGAGCCCTACGAGC GCCATTCGTCGGTGCGCTTCCGTGTCGACGGCACGCTGCGCGAGGTGGTGCAGCCCAACCGGGCGTTGCACGCGGCACTG ATCTCGCGCCTGAAGATCATGGCCGAGCTCGACATCGCCGAGAAGCGCCTGCCGCAGGACGGCCGCATCTCCCTGCGCAT CGGCACGCGGGCGGTGGACGTGCGCGTCTCCACCCTGCCCAGCGCCCACGGCGAGCGGGCGGTGCTGCGCCTGCTGGACA AGAGCGAAAGCAAGCTCAGCCTGGAGTCGGTGGGCATGACGGGCGAGACGCTGCGGCGCTTCCTCAACCTCATCGCCCAG CCGCACGGCATCATCCTCGTCACCGGCCCCACCGGCTCGGGCAAGACCACCACGCTGTACGCGGCGCTGTCGCGGCTGGA CGCGAACACCAGCAACATCATGACGGTGGAGGACCCGATCGAGTACGAGCTGCCCGGCATCGGCCAGACGCAGGTCAACG CCAAGATCGACCTCGACTTCGCCAAGGCCCTGCGTGCCATCCTGCGGCAGGACCCGGACGTGATCATGATCGGCGAGATC CGCGACTACGAGACCGCCCAGATCGCCATCCAGGCCTCGCTCACCGGCCACCTGGTGCTGGCCACGCTGCACACCAACGA CGCGGCCAGCGCCGTCAACCGCCTGATCGACATGGGCGTGGAGCCTTTCCTGCTCAGCTCGTCGCTGCTGGGCGTGCTGG CCCAGCGGCTTGTGCGCAAGCTGTGCTCGCACTGCCATGGCCCGGGCTGCGGCGAATGCGGCCAGACCGGCTACCAGGGC CGCACCGGCGTGTTCGAGCTGATGGTGACGGACGAGCACATCCGTGCCCTGATCCACAACCGCGCCGCCGAGGCCGACCT GCGCAACGCCGCGCTGGCTGCGGGGATGACGCTGATGCGGGACGACGGCGAGCGGCTGGTGCGCGAAGGCATCACCTCGC GCGAGGAGCTGGTGCGCGTGACGCGCGAATAG Protein sequence : MARYPLPYAFARGSQLLLEEDGDSLTLWHAGMPPGSAWTEVMRKWRVRALQQLDASALAQRISAAYAQGESSAATVVSEV QNDADLSRIMQELPAVEDLLETSDDAPIIRMLNALLTQAARDGASDIHIEPYERHSSVRFRVDGTLREVVQPNRALHAAL ISRLKIMAELDIAEKRLPQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSESKLSLESVGMTGETLRRFLNLIAQ PHGIILVTGPTGSGKTTTLYAALSRLDANTSNIMTVEDPIEYELPGIGQTQVNAKIDLDFAKALRAILRQDPDVIMIGEI RDYETAQIAIQASLTGHLVLATLHTNDAASAVNRLIDMGVEPFLLSSSLLGVLAQRLVRKLCSHCHGPGCGECGQTGYQG RTGVFELMVTDEHIRALIHNRAAEADLRNAALAAGMTLMRDDGERLVREGITSREELVRVTRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-95 | 56 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-95 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_004620674.1 | general secretion pathway protein E | VFG0182 | Protein | 4e-109 | 58 |
| gspE | YP_004620674.1 | general secretion pathway protein E | VFG1876 | Protein | 4e-106 | 55 |
| gspE | YP_004620674.1 | general secretion pathway protein E | VFG2048 | Protein | 3e-96 | 55 |
| gspE | YP_004620674.1 | general secretion pathway protein E | VFG2426 | Protein | 3e-65 | 47 |
| gspE | YP_004620674.1 | general secretion pathway protein E | VFG0233 | Protein | 4e-73 | 46 |
