Gene Information

Name : gspG (Rta_35330)
Accession : YP_004620665.1
Strain : Ramlibacter tataouinensis TTB310
Genome accession: NC_015677
Putative virulence/resistance : Virulence
Product : pseudopilin, general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3769048 - 3769488 bp
Length : 441 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTCTCTTACCACCCGCCTCCGCCGGGCCGCCCAGGCCGGCTTCACCCTCATCGAACTGATGGTGGTGCTCGTGAT
CATCGGCGTGCTGGCCGCCCTGATCGTGCCCAACGTGCTGGACCGCGCCGACGACGCGCGCGCCACCGCGGCGCGCACCG
ACGTCAACAACCTGATGCAGGCGCTCAAGCTCTACCGCCTGGACAACCAGCGCTATCCCACGGGCGAACAGGGCCTGCAG
GCCCTGGTGGCGCGCCCGAGCGCCGCTCCGCAGCCGGCCAACTGGAAGCCCTACCTCGAGAAGCTTCCCAACGACCCCTG
GGGCCGTCCGTACCAGTACCTCAACCCCGGCGTGAAGGGCGAGATAGACGTCATGTCCTTCGGCGCCGACGGCCAGCCCG
GCGGCGAGGGCAAGAATGCCGACGTGGGCAGCTGGCAGTAA

Protein sequence :
MKSLTTRLRRAAQAGFTLIELMVVLVIIGVLAALIVPNVLDRADDARATAARTDVNNLMQALKLYRLDNQRYPTGEQGLQ
ALVARPSAAPQPANWKPYLEKLPNDPWGRPYQYLNPGVKGEIDVMSFGADGQPGGEGKNADVGSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-20 51
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-20 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_004620665.1 pseudopilin, general secretion pathway protein G VFG0180 Protein 8e-24 56
gspG YP_004620665.1 pseudopilin, general secretion pathway protein G VFG2050 Protein 5e-21 50