Gene Information

Name : Rta_34840 (Rta_34840)
Accession : YP_004620616.1
Strain : Ramlibacter tataouinensis TTB310
Genome accession: NC_015677
Putative virulence/resistance : Resistance
Product : response regulator OmpR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3712897 - 3713583 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTGTCCTGCTTGTCGAAGACGACGAAATGATCGGCCCCAGCCTGCAGCGGGCCCTGGAATCCAATGGCTGGTCGGT
CGACTGGGTCAAGGAAGGCCTGCTGGCGCAAAGCGCCTTGTCCGACGGCGGCTACGCCTGCGTACTGCTGGACCTGGGGC
TGCCCCGCCGCGACGGCATCGAGGTGCTGCGCAAGGCGCGCGCCGAGGGCGACCGCACGCCGGTGCTGGTGCTCACCGCC
CGCGACGGCGTGGACGACCGCATCCTGGGGCTGGACGTGGGCGCCGACGATTACCTGATCAAGCCCTACGAATTCCGCGA
GCTGCTGGCGCGCATGCGGGCCGTGATCCGCCGGCGCGACGGCAGCGCCCACTCCATCATCGGCGGTGCCGGCGTGCAGA
TGGACCTGACCACGCGCGAGGTGCTGGTGGCGGGCGAACGCTCGCAGCTGTCGGCGCGCGAGTTCGCGCTGCTGCACGCC
CTGCTGGAGCGTCCCGGCGCCATCCTCTCGCGCGACCAGCTGGAGTCGCGCATCTACGGCTGGGGCGAGGAGGTGAGCAG
CAACGCGGTCGACGTCCTGATCCACGGCATGCGCCGCAAGCTGGGGCCGGACACCATCCGCAACGTGCGCGGGCTGGGCT
GGCGCATCGCAGCCGCCGCGCCGACGCCGGGGAGCCAGGGCGGATGA

Protein sequence : 
MRVLLVEDDEMIGPSLQRALESNGWSVDWVKEGLLAQSALSDGGYACVLLDLGLPRRDGIEVLRKARAEGDRTPVLVLTA
RDGVDDRILGLDVGADDYLIKPYEFRELLARMRAVIRRRDGSAHSIIGGAGVQMDLTTREVLVAGERSQLSAREFALLHA
LLERPGAILSRDQLESRIYGWGEEVSSNAVDVLIHGMRRKLGPDTIRNVRGLGWRIAAAAPTPGSQGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rta_34840 YP_004620616.1 response regulator OmpR BAC0487 Protein 6e-37 43
Rta_34840 YP_004620616.1 response regulator OmpR BAC0638 Protein 3e-28 42