Gene Information

Name : Rta_30200 (Rta_30200)
Accession : YP_004620148.1
Strain : Ramlibacter tataouinensis TTB310
Genome accession: NC_015677
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 3217720 - 3218604 bp
Length : 885 bp
Strand : -
Note : -

DNA sequence :
ATGCTGAACATCGAACAGATCAATACCTTTGTCGCCGTTGTTGACGCAAATAGCTTCCTGGGCGCGGCCGAGCGCCTGGG
CCTAGCGCCACCCACGGTGAGCCAGCACATCCGAAAGCTGGAAGAAGCATTGGGTAAGCAGCTCCTCCAACGAAGCCGCA
GCGAATGCAAGCTCACCGTCGAGGGCGAGCGGTTCCTGCCGCACGCGCGCGCCTTGCTCGCTCTTGAGAGCCGGGCTCGC
GGTGCCTTGTCCACCCAGACACTCAACATCGCCGCCAGCAGCAACATCGGCGCCTACCACCTGCCCGGGCTGCTGAAACG
CTTCGCTGACCTGTTTTCCCCTGAGGAGCGGCCCGCCGTCGAAGTGAGCGTCGGCCGCAACTCGGAAGTTCAGGAGCAGG
TCCGCACCGGGATGGCCCAGATCGGGTTGGTGGAGTGGGTGCAGCCTCGCCCTGGCCTGAGCTCCTTCAAGTGGGGCAGC
GAGAAGATGGTGGTCATCGTTCCTCCCGGTCACCCGTGGGAGCGCAAGCGCGAGGTCAGTCCTGAGCAGCTGTTTCGGAC
CCCCATGGTCGCCGGCGAGCCTGGGACGGGCACCGCCACCTTGTTGCGGGACCTGTTCGGTTCATTGGTGGGAGACCTGG
CGACCACGATGAGCCTAGGTAGCACCGAAGCAGTCAAACGGGCTGTGATGGCGGGCCTGGGTGTTTCGCTGGTCATGGAG
TCGGCCGTCCGCCTCGAGACGGAGCAAGGCTGGTTGGTTGCGCTGCCGTTGGGCGGCGCCAAGGTGGAGAAGACTTTGCA
TGCCATGGTGCCCGACGACACACTTGGCCTCGATATGCCGCGCGCGTTCCTGCAGGGCGCGCTGAAAGTAGCCGCTCTGT
CGTGA

Protein sequence :
MLNIEQINTFVAVVDANSFLGAAERLGLAPPTVSQHIRKLEEALGKQLLQRSRSECKLTVEGERFLPHARALLALESRAR
GALSTQTLNIAASSNIGAYHLPGLLKRFADLFSPEERPAVEVSVGRNSEVQEQVRTGMAQIGLVEWVQPRPGLSSFKWGS
EKMVVIVPPGHPWERKREVSPEQLFRTPMVAGEPGTGTATLLRDLFGSLVGDLATTMSLGSTEAVKRAVMAGLGVSLVME
SAVRLETEQGWLVALPLGGAKVEKTLHAMVPDDTLGLDMPRAFLQGALKVAALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13520.1 transcriptional regulator Not tested PAGI-7 Protein 8e-37 45