Gene Information

Name : Rta_29800 (Rta_29800)
Accession : YP_004620103.1
Strain : Ramlibacter tataouinensis TTB310
Genome accession: NC_015677
Putative virulence/resistance : Virulence
Product : translocation protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 3169231 - 3170031 bp
Length : 801 bp
Strand : -
Note : -

DNA sequence : 
ATGTATGAGTTCGACTTGGCGCACATTGGGACTGGCTTCGCCGATATTCTGAAGACTGTTGCGCTGTGCAGCCTGCGCCT
GTACGTGATTTTTCTCGTGCTGCCGGCCATGGCGGGCGAGGCCGTCCAAGGCATGGTGCGTACCGGCTTCGTCATTTTGG
TGGGCCTGTTCATCGCCGCCGGCATGCCGGCGCAGGACGTGGGCAACCTGCCGGCGTCCAGCTGGCTCACGCTGGCCATC
AAGGAGGCCGTGATCGGGCTGGTGCTGGGATTCGCCGTATCCACGGTGTTCTGGGTCGCCGAGTGCGTTGGCGCCCTGGT
CGACACCCAGGCCGGCTACAACAACGTGCAGATGACCAACCCACTGAGCGGCCAGCAAAGCACGCCCGTGTCCGACATGC
TGCTGCAGCTGGTGATCGCGGTGTTCTTCGCGTTGGGCGGCATGCTGGTGCTGCTGGGCGCTGTGTTCGAATCGTTCAAG
GTATGGCCGCTGCTGGCGCCGATGCCGTCGACCGAGGGTTTCTCCGAGGTCTTCTTCCTTCGCGAGGTTGACGGCCTGAT
GACGGCAACCGTGAAGTTCGCGGCGCCGGTGCTGCTGGTGCTGGTGCTGATCGACCTGGGCTTCGGGCTGGTAACGCGCG
CGGCGGACAAGCTGGAGCCGCATTCGCTGGCGCAGCCGGTTAAGGGCGCCGTGGCCATGCTGCTGCTCGCCTTGCTCTGC
GGCGTGTTCGTCGCGGAGGCCCGGCAGCACCTGCTGCCGCGCGACCTGCTGCCAAGGCTCGAGAAGCTGCTGCCGCACTG
A

Protein sequence : 
MYEFDLAHIGTGFADILKTVALCSLRLYVIFLVLPAMAGEAVQGMVRTGFVILVGLFIAAGMPAQDVGNLPASSWLTLAI
KEAVIGLVLGFAVSTVFWVAECVGALVDTQAGYNNVQMTNPLSGQQSTPVSDMLLQLVIAVFFALGGMLVLLGAVFESFK
VWPLLAPMPSTEGFSEVFFLREVDGLMTATVKFAAPVLLVLVLIDLGFGLVTRAADKLEPHSLAQPVKGAVAMLLLALLC
GVFVAEARQHLLPRDLLPRLEKLLPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB8 BAB07850.1 HrpB8 Virulence Hrp PAI Protein 1e-39 56
hrpB8 AAF61279.1 HrpB8 Virulence Hrp PAI Protein 1e-39 56
hrcT AAP34337.1 HrcT Virulence Hrp PAI Protein 5e-40 56
hrpB8 YP_198732.1 protein HrpB8 Virulence Hrp PAI Protein 1e-39 56
hrcT NP_640769.1 HrcT protein Virulence Hrp PAI Protein 7e-40 56
hrcT NP_636612.1 HrpB8 protein Virulence Hrp PAI Protein 1e-41 55
XC_3004 YP_244072.1 HrpB8 protein Virulence Hrp PAI Protein 1e-41 55
hrpB8 AAB08463.1 HrpB8 Virulence Hrp PAI Protein 3e-40 55
hrcT YP_362165.1 HrcT protein Virulence Hrp PAI Protein 4e-40 55