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Name : lysU (Rta_28340) Accession : YP_004619956.1 Strain : Ramlibacter tataouinensis TTB310 Genome accession: NC_015677 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3018922 - 3020451 bp Length : 1530 bp Strand : + Note : - DNA sequence : ATGTCCGACGTCCACAGTTCGCATAATCCGGCTCCTGACGACAACCAGCTGATCGCCGAGCGCCGCGAAAAACTCAAGGC CTTGCGCGAAGCGCAGAAGGCCGGTGGCGGCGTCGCCTTCCCGAACGACTTCAAACCCTCCGACCACGCGGCCACGCTGC TGCAGCGGCACGGCCACAAGGAAGCACCGCAACTGGAAGCCGAGGGCATCACCGCGCGCGTCGCCGGCCGCATGATGCTC AAGCGGGTGATGGGCAAGGCCAGCTTCGCCACCCTGCAGGACGCCACCGGCCGCCTCCAGGTGTACGTGACCCGCGACGG CGTGGGCGAGGAGGTGTACGCCGCCTTCAAGCACTGGGACCTGGGCGACGTCGTGGGCTGCGAGGGCAAGGTCTTCAAGA CCAAGACCGGCGAGCTGTCCGTCAACGCCACGTCCATCCGGCTGCTCACCAAGAGCCTGCGGCCCATGCCGGACAAGTTC CACGGCGTGGCCGACCAGGAGGTCAAGTACCGCCAGCGCTACGTGGACCTGATGACCGACGAGGACGCCCGCCGGCGCTT CGTCGCGCGCAGCAAGGCCGTGGCCGGCATCCGCGACTTCATGGTGCAGCACGGCTTCCTGGAGGTGGAGACGCCCATGC TCCACCCCATTCCCGGCGGAGCCAACGCACGGCCCTTCGTGACGCACCACAACGCGCTGGACCAGGAGATGTTCCTGCGC ATCGCACCCGAGCTGTACCTCAAGCGCCTGATCGTCGGCGGCTTCGAGCGCGTGTTCGAGATCAACCGCAACTTCCGCAA CGAAGGCATCTCGGTGCGCCACAACCCCGAGTTCACCATGATGGAGTTCTACGCGGCGTACTGGAACTACCGCGACCTGA TGGATTTCACCGAAGCCTTGGTGCGCGACGCGGCCCAGAAAGCGGTGGGTACCCTGCAACTCACCTATGGCGGCAGGCCG GTGGACCTGGCGCAGCCCTTCGCGCGGCTGACCATCCGCGAGGCCATCGTCGCGCACACCGGGGCGGGCGACAACGTCGA CAATCGCGACTGGCTGACCGGCGCACTGCGCAAGGCCGGCCTCACCGAGGAGAAGCACGGGCTGGCGGGCCGCTCGCTGG CCAGCCTGCAGGTGCTGTACTTCGAGGAGACGGTGGAAGAAAAGCTCTGGCAGCCCACGTTCATCATGGAGCACCCCACG GAGATCTCGCCGCTGGCCCGCGCCAACGACCAGCGGCCCGAGGTGACCGAGCGCTTCGAGCTGTACATCACCGGACGCGA GTTCGGCAACGGCTTCTCCGAGCTCAACGACGCCGAGGAACAGACGGCGCGCTTCGCCGCCCAGGTCAACGCCAAGGACG CGGGCGATGACGAGGCCATGTTCTTCGACCACGACTTCGTGCGCGCGCTGGAGTACGGCATGCCGCCCACGGGCGGCTGC GGCATCGGCATCGACCGGCTGATGATGCTGCTCACCGACAGCCCCAGCATCCGCGACGTGATCCTGTTCCCGGCGCTGCG CCGGGAATGA Protein sequence : MSDVHSSHNPAPDDNQLIAERREKLKALREAQKAGGGVAFPNDFKPSDHAATLLQRHGHKEAPQLEAEGITARVAGRMML KRVMGKASFATLQDATGRLQVYVTRDGVGEEVYAAFKHWDLGDVVGCEGKVFKTKTGELSVNATSIRLLTKSLRPMPDKF HGVADQEVKYRQRYVDLMTDEDARRRFVARSKAVAGIRDFMVQHGFLEVETPMLHPIPGGANARPFVTHHNALDQEMFLR IAPELYLKRLIVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTEALVRDAAQKAVGTLQLTYGGRP VDLAQPFARLTIREAIVAHTGAGDNVDNRDWLTGALRKAGLTEEKHGLAGRSLASLQVLYFEETVEEKLWQPTFIMEHPT EISPLARANDQRPEVTERFELYITGREFGNGFSELNDAEEQTARFAAQVNAKDAGDDEAMFFDHDFVRALEYGMPPTGGC GIGIDRLMMLLTDSPSIRDVILFPALRRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-133 | 56 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-75 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysU | YP_004619956.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 7e-134 | 56 |
