Gene Information

Name : xerD (Rta_25920)
Accession : YP_004619711.1
Strain : Ramlibacter tataouinensis TTB310
Genome accession: NC_015677
Putative virulence/resistance : Unknown
Product : site-specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2759236 - 2760126 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence :
TTGAGGCCCGACGCGTCGGTCGACGCTTTCATCGACGCCCTCTGGCTGGAGGAGGGCCTGGCCAGGAACACCCTGCAGGC
CTACCGGCGCGACCTGGCCCTGTACGCCGCCTGGCTGCGCGAGGCGCAGGGCCGCGCGCTGCCGGCCACCACCGAAGCCG
ACCTGCACGCCTACTTCGCGGCGCGCCACGCGCAGACCAAGGCCACCTCGGCCAACCGCCGGCTGGCGGTGTTCAAGCGC
TATTTCCGCTGGGCGCTGCGCGAGCGCATCGTGCAGGCCGACCCCACGCTCAAGCTGGAGCCGGCCAAGCGGCCGCTGCG
CGTGCCGCGCACGCTGACGCAGGCCCAGGTCGAGGCGCTGCTGGCCGCGCCGGACGTGGACACGCCGCTGGGCCTGCGCG
ACCGCGCCATGCTGGAGCTGATGTACGCCAGCGGCCTGCGCGTGAGCGAGCTGGTCACGCTCAAGACGCTGAACGTCGGC
CTGGGCGAGCACGTGCTGCGCGTCATGGGCAAGGGCGGCAAGGAGCGCCTGGTGCCGTTCGGCGAGGTGGCGCGCGACTG
GCTGGTGCGCTTCCTGCGCGAGGCCAGGGCGGCCATCCTGGACGGGCAGCAGACCGAGGACCTGTTCGTCACCGCGCGCG
GCCAGGGCATGACGCGCGCCATGTTCTGGGTGATCGTCAAGAAGCACGCGCGCACCGCCGGCATCACCGCGCCGCTGTCC
CCCCACACGCTGCGCCACGCCTTCGCCACGCACCTGCTCAACCACGGCGCCGACCTGCGCGCGGTGCAGATGCTGCTGGG
GCATGCGGACATCTCCACCACCACCCTCTACACCCACGTGGCGCGCGAGCGGCTCAAGCAGCTGCACGAAAAACACCACC
CGCGCGGCTGA

Protein sequence :
MRPDASVDAFIDALWLEEGLARNTLQAYRRDLALYAAWLREAQGRALPATTEADLHAYFAARHAQTKATSANRRLAVFKR
YFRWALRERIVQADPTLKLEPAKRPLRVPRTLTQAQVEALLAAPDVDTPLGLRDRAMLELMYASGLRVSELVTLKTLNVG
LGEHVLRVMGKGGKERLVPFGEVARDWLVRFLREARAAILDGQQTEDLFVTARGQGMTRAMFWVIVKKHARTAGITAPLS
PHTLRHAFATHLLNHGADLRAVQMLLGHADISTTTLYTHVARERLKQLHEKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-54 52
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-54 52